RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 FOXRED2Q8IWF2 684 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 CMTM1Q8IZ96 169 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 CA13Q8N1Q1 262 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 BCORP1Q8N888 145 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 SLC38A9Q8NBW4 561 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 OR4B1Q8NGF8 309 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 OR56B2PQ8NGI1 322 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 OR2V1Q8NHB1 315 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 OR14C36Q8NHC7 312 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 NPRL2Q8WTW4 380 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 CA5BP1Q8WTZ4 195 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 ZCCHC14Q8WYQ9 949 aaKnown RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 ZFYVE21Q9BQ24 234 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 VN1R3Q9BXE9 311 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 RBKSQ9H477 322 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 ELL3Q9HB65 397 aaPredicted RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 LPAR2Q9HBW0 351 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 AURKAIP1Q9NWT8 199 aaPredicted RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 FAM206AQ9NX38 181 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 OR6C3Q9NZP0 311 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 VDAC3Q9Y277 283 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 URGCP-MRPS24S4R325 110 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 LTBP2Q14767 1821 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 NCOA6Q14686 2063 aaPredicted RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 A0A0A6YYD4 124 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 C20orf202A1L168 122 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 OR6C6A6NF89 314 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 NKX6-3A6NJ46 265 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 NDUFS8O00217 210 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 P2RY10O00398 339 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 SCDO00767 359 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 SOCS1O15524 211 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 HCRTR2O43614 444 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 NPIPB7O75200 414 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 KBTBD11O94819 623 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 SCGB1D1O95968 90 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TOMM40O96008 361 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 IFNA5P01569 189 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 REG1AP05451 166 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 WNT2P09544 360 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 NPSP0C0P6 89 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 CT62P0C5K7 136 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TCN2P20062 427 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 PGCP20142 388 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 FUT3P21217 361 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 CTSSP25774 331 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 APLNRP35414 380 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ARR3P36575 388 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 NKX2-1P43699 371 aaPredicted RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 NPBWR2P48146 333 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 FHITP49789 147 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 DCAF7P61962 342 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 RBX1P62877 108 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 CCL20P78556 96 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 RPL19P84098 196 aaKnown RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 ZFP36L1Q07352 338 aaKnown RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 ZNF77Q15935 545 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ACKR1Q16570 336 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 SRSF7Q16629 238 aaKnown RBP eCLIP5.81□□□□□ -1.48
USP28-207ENST00000538475 BSXQ3C1V8 233 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 DEFB134Q4QY38 66 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 LY6G5CQ5SRR4 150 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 WDR25Q64LD2 544 aaPredicted RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 NCR3LG1Q68D85 454 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TEX38Q6PEX7 206 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 FIGLAQ6QHK4 219 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TOMM20LQ6UXN7 152 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 RABEPKQ7Z6M1 372 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 OR4N5Q8IXE1 308 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ZNF100Q8IYN0 542 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 OR5AS1Q8N127 324 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 SLC39A11Q8N1S5 342 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 OR5T1Q8NG75 326 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 OR2T10Q8NGZ9 312 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 GPR119Q8TDV5 335 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 RTN4IP1Q8WWV3 396 aaPredicted RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 MSI2Q96DH6 328 aaKnown RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 FAM122AQ96E09 287 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ARHGAP5-AS1Q96IT6 56 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TMEM56Q96MV1 263 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TECTBQ96PL2 329 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ATP5SQ99766 215 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ATG101Q9BSB4 218 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 PECRQ9BY49 303 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 OR2J1Q9GZK6 312 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 WWTR1Q9GZV5 400 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 PBOV1Q9GZY1 135 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 PARP12Q9H0J9 701 aaKnown RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 SH3BGRL3Q9H299 93 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 IL17BQ9UHF5 180 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 PRSS50Q9UI38 385 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 ANXA10Q9UJ72 324 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 CDC42EP3Q9UKI2 254 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 RCL1Q9Y2P8 373 aaKnown RBP5.81□□□□□ -1.48
USP28-207ENST00000538475 TIMM9Q9Y5J7 89 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TMEM56-RWDD3S4R434 201 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 LRP4O75096 1905 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms