RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RANP62826 216 aaKnown RBP14.8□□□□□ -0.04
SCARB1-205ENST00000538291 DYNLRB2Q8TF09 96 aa14.8□□□□□ -0.04
SCARB1-205ENST00000538291 TMEM167BQ9NRX6 74 aa14.8□□□□□ -0.04
SCARB1-205ENST00000538291 TMEM38BQ9NVV0 291 aa14.8□□□□□ -0.04
SCARB1-205ENST00000538291 TMEM210A6NLX4 147 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 FABP4P15090 132 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 IL24Q13007 206 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 WDFY2Q96P53 400 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 ABHD14AQ9BUJ0 271 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 TECRQ9NZ01 308 aaKnown RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 DOCK2Q92608 1830 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 NEURL1O76050 574 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 RPS4Y1P22090 263 aaKnown RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 GPR6P46095 362 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 KCNMB1Q16558 191 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 TUSC1Q2TAM9 212 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 C1orf185Q5T7R7 199 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 Q8WTZ3 238 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 AKAP11Q9UKA4 1901 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 GSTZ1O43708 216 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 ORM1P02763 201 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 HOXD4P09016 255 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 SURF2Q15527 256 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 CCDC144NLQ6NUI1 221 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 TBC1D26Q86UD7 250 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 FLYWCH2Q96CP2 140 aaKnown RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 LOXL4Q96JB6 756 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 SLC7A10Q9NS82 523 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 PRSS54Q6PEW0 395 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 TMEM88Q6PEY1 159 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 DOLPP1Q86YN1 238 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 UCN2Q96RP3 112 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 MMP24Q9Y5R2 645 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 DNAJC13O75165 2243 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 SPINK2P20155 84 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 VAMP3Q15836 100 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 MPV17LQ2QL34 196 aa14.79□□□□□ -0.04
SCARB1-205ENST00000538291 SP7Q8TDD2 431 aaPredicted RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 TNRC6CQ9HCJ0 1690 aaKnown RBP14.79□□□□□ -0.04
SCARB1-205ENST00000538291 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 RBPMS2Q6ZRY4 209 aaKnown RBP14.78□□□□□ -0.04
SCARB1-205ENST00000538291 TTTY12Q9BZ98 90 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 SLIRPQ9GZT3 109 aaKnown RBP14.78□□□□□ -0.04
SCARB1-205ENST00000538291 MMP26Q9NRE1 261 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 GEMIN2O14893 280 aaKnown RBP14.78□□□□□ -0.04
SCARB1-205ENST00000538291 SYNGR2O43760 224 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 MPC2O95563 127 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 GALR1P47211 349 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 NHLH1Q02575 133 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 NHLH2Q02577 135 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 GVQW1Q8N7I0 195 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 DUSP18Q8NEJ0 188 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 OR5A2Q8NGI9 324 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 PRNDQ9UKY0 176 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
SCARB1-205ENST00000538291 SPINK4O60575 86 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 COX6B1P14854 86 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 SSX1Q16384 188 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 A0A1W2PQF6 199 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 CLDN34H7C241 214 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 CA11O75493 328 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 INHBBP09529 407 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 HLA-GP17693 338 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 DMKNQ6E0U4 476 aaPredicted RBP14.78□□□□□ -0.04
SCARB1-205ENST00000538291 ZNF66Q6ZN08 573 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 NRTNQ99748 197 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 LPAR2Q9HBW0 351 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 UFC1Q9Y3C8 167 aa14.78□□□□□ -0.04
SCARB1-205ENST00000538291 HRKO00198 91 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 PIPOXQ9P0Z9 390 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 TIAL1Q01085 375 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCARB1-205ENST00000538291 RPEL1Q2QD12 228 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 KRTCAP3Q53RY4 240 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 TEX261Q6UWH6 196 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 OR10A7Q8NGE5 316 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 OR10AC1Q8NH08 325 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 RSRP1Q9BUV0 290 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 U3KQ87 197 aa14.77□□□□□ -0.04
SCARB1-205ENST00000538291 OR5AL1P0C617 328 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 ST3GAL2Q16842 350 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 FTH1P19P0C7X4 201 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 SPNP16150 400 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 AANATQ16613 207 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 OR8I2Q8N0Y5 310 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 HARBI1Q96MB7 349 aa14.77□□□□□ -0.05
SCARB1-205ENST00000538291 PPIAL4EA0A075B759 164 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 PPIAL4DF5H284 164 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 PPIAL4FP0DN26 164 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 CFHR5Q9BXR6 569 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 PPIAL4AQ9Y536 164 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 IGHV4-34P06331 123 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 USF1P22415 310 aaPredicted RBP14.76□□□□□ -0.05
SCARB1-205ENST00000538291 HNRNPA3P51991 378 aaKnown RBP14.76□□□□□ -0.05
SCARB1-205ENST00000538291 POLR2GP62487 172 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCARB1-205ENST00000538291 CLEC2AQ6UVW9 174 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 C9orf40Q8IXQ3 194 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 C1orf174Q8IYL3 243 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 TMEM37Q8WXS4 190 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 DIRC2Q96SL1 478 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 MS4A7Q9GZW8 240 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms