RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.3□□□□□ -0.92
RTN3-208ENST00000537981 B3GALT1Q9Y5Z6 326 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 A0A1W2PN81 502 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 LRRC3CA6NJW4 275 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 B4DEV8 164 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 MSTNO14793 375 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 TSPAN2O60636 221 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 CHRNA7P36544 502 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 POLR2LP62875 67 aaKnown RBP9.3□□□□□ -0.92
RTN3-208ENST00000537981 ZNF92Q03936 586 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 PRDX1Q06830 199 aaKnown RBP9.3□□□□□ -0.92
RTN3-208ENST00000537981 ARFRP1Q13795 201 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 CHRFAM7AQ494W8 412 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 DEFB134Q4QY38 66 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 LCN15Q6UWW0 184 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 PARS2Q7L3T8 475 aaKnown RBP9.3□□□□□ -0.92
RTN3-208ENST00000537981 ZNF709Q8N972 641 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 OR2L3Q8NG85 312 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 C8orf44Q96CB5 159 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 ZC2HC1AQ96GY0 325 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 LOXL4Q96JB6 756 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 SELENOKQ9Y6D0 94 aa9.3□□□□□ -0.92
RTN3-208ENST00000537981 A0A1W2PR80 420 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 CSTAP01040 98 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 HIST1H1DP16402 221 aaKnown RBP9.29□□□□□ -0.92
RTN3-208ENST00000537981 GPR1P46091 355 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 ZNF117Q03924 483 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 EGR4Q05215 589 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 RUNX2Q13950 521 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
RTN3-208ENST00000537981 ST6GALNAC3Q8NDV1 305 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 CADM4Q8NFZ8 388 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 OR5T1Q8NG75 326 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 OR5D18Q8NGL1 313 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 PTPMT1Q8WUK0 201 aaPredicted RBP9.29□□□□□ -0.92
RTN3-208ENST00000537981 TNFRSF14Q92956 283 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 VAMP8Q9BV40 100 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 G6PC2Q9NQR9 355 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 TMEM106BQ9NUM4 274 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 SCN10AQ9Y5Y9 1956 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 FGF17O60258 216 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 HLA-HP01893 362 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 PEBP1P30086 187 aaKnown RBP9.29□□□□□ -0.92
RTN3-208ENST00000537981 DUSP3P51452 185 aaPredicted RBP9.29□□□□□ -0.92
RTN3-208ENST00000537981 PHLDA2Q53GA4 152 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 AGBL4Q5VU57 503 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 TMEM25Q86YD3 366 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 OR5C1Q8NGR4 320 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 OR11L1Q8NGX0 322 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 PLPPR1Q8TBJ4 325 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 C1orf147Q96MC9 270 aaPredicted RBP9.29□□□□□ -0.92
RTN3-208ENST00000537981 TECTBQ96PL2 329 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 RNF2Q99496 336 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 GPR84Q9NQS5 396 aa9.29□□□□□ -0.92
RTN3-208ENST00000537981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.29□□□□□ -0.92
RTN3-208ENST00000537981 PRUNE2Q8WUY3 3088 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 SHISA7A6NL88 538 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 TMEM14DPA8MWL7 114 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 SH2D1BO14796 132 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 SRSF10O75494 262 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 CTLA4P16410 223 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 ZNF74Q16587 644 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 FBXW12Q6X9E4 464 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 TMPRSS7Q7RTY8 843 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 OR4C5Q8NGB2 326 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 OR5L2Q8NGL0 311 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 RHBDD1Q8TEB9 315 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 LIPHQ8WWY8 451 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 DAZLQ92904 295 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 PTX4Q96A99 478 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 GPX7Q96SL4 187 aaPredicted RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 GPHA2Q96T91 129 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 TBL1XR1Q9BZK7 514 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 HHLA2Q9UM44 414 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 DIDO1Q9BTC0 2240 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 CHD7Q9P2D1 2997 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 TRIOBPQ9H2D6 2365 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 TET1Q8NFU7 2136 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 FAM230AA0A1W2PPH8 454 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 PROB1E7EW31 1015 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 SLC16A7O60669 478 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 IFNA21P01568 189 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 DYNLT3P51808 116 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 PIGPP57054 158 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 HIST1H3AP68431 136 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 PSG6Q00889 435 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 SHHQ15465 462 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 FBLN7Q53RD9 439 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 PET117Q6UWS5 81 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 MRPL52Q86TS9 123 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 WDFY1Q8IWB7 410 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 MRPL43Q8N983 215 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 OR5L1Q8NGL2 311 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms