RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 UBCP0CG48 685 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 SELLP14151 372 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CPT2P23786 658 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CFPP27918 469 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 HSD11B1P28845 292 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 PITPNBP48739 271 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CX3CR1P49238 355 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 MTNR1BP49286 362 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 MECP2P51608 486 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CRISP1P54107 249 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 RPS27AP62979 156 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 UBA52P62987 128 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 GRB2P62993 217 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 HOXA4Q00056 320 aaPredicted RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 FAM74A3Q4VXF1 159 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 KLF17Q5JT82 389 aaPredicted RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 LINC01590Q5TEZ4 76 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 C12orf73Q69YU5 71 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 SFRP4Q6FHJ7 346 aaPredicted RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 HAGHLQ6PII5 290 aaPredicted RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 LYPD2Q6UXB3 125 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 LRRN1Q6UXK5 716 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 BCL6BQ8N143 479 aaPredicted RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 OR8J1Q8NGP2 316 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 Q8TCH9 128 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 PHYHIPLQ96FC7 376 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CXorf58Q96LI9 332 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 TMEM68Q96MH6 324 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CMTM3Q96MX0 182 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 DUX5Q96PT3 197 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 INTS14Q96SY0 518 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 THAP7Q9BT49 309 aaPredicted RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CMC2Q9NRP2 79 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 NUDT15Q9NV35 164 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 MRPL15Q9P015 296 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 RNF7Q9UBF6 113 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 METTL1Q9UBP6 276 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CLN8Q9UBY8 286 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CARHSP1Q9Y2V2 147 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 EXOSC1Q9Y3B2 195 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 TRAV40A0A0B4J280 105 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 TMEM89A2RUT3 159 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 ANKRD30BLA7E2S9 258 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 C3orf80F5H4A9 247 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 SSNA1O43805 119 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 ENTPD6O75354 484 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 GLCEO94923 617 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 SERPINA3P01011 423 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 GRPP07492 148 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 IGHV4-38-2P0DP08 117 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 CXCL3P19876 107 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 RAB4AP20338 218 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PAICSP22234 425 aaKnown RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 CD80P33681 288 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 WNT4P56705 351 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 GMFBP60983 142 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 SPCS3P61009 180 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 BDH1Q02338 343 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PAX2Q02962 417 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PAX8Q06710 450 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PTGES3Q15185 160 aaKnown RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 P2RY14Q15391 338 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 OR8B8Q15620 311 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PCK2Q16822 640 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PAN3Q58A45 887 aaKnown RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 WDR25Q64LD2 544 aaPredicted RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 C22orf42Q6IC83 251 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 ATRAIDQ6UW56 229 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 CD300LDQ6UXZ3 194 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 MOB3CQ70IA8 216 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 FAM57BQ71RH2 274 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 DPY19L4Q7Z388 723 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 PXT1Q8NFP0 134 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 RAB40AQ8WXH6 277 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 ZMYND19Q96E35 227 aaPredicted RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 TECTBQ96PL2 329 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 OCSTAMPQ9BR26 566 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 NUDT16L1Q9BRJ7 211 aaKnown RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 ABHD6Q9BV23 337 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 OR51V1Q9H2C8 321 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 AMBNQ9NP70 447 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 ZFP57Q9NU63 452 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 C1orf123Q9NWV4 160 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 DNAJC27Q9NZQ0 273 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
SFSWAP-202ENST00000535202 C5orf52A6NGY3 159 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 DNAJC9-AS1A6NH13 148 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 PRR23D1E9PI22 279 aaPredicted RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 LGALS8O00214 317 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 FSTL3O95633 263 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 IFNA10P01566 189 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 GLAP06280 429 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 H2BFMP0C1H6 154 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 PRR23D2P0DMB1 279 aaPredicted RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 CXCL2P19875 107 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 MNDAP41218 407 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 COMPP49747 757 aaPredicted RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF121P58317 390 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms