RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ROS1P08922 2347 aa13.83□□□□□ -0.2
MCF2L-232ENST00000535094 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
MCF2L-232ENST00000535094 CD63P08962 238 aa13.83□□□□□ -0.2
MCF2L-232ENST00000535094 LRP11Q86VZ4 500 aa13.83□□□□□ -0.2
MCF2L-232ENST00000535094 SPACA9Q96E40 222 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-232ENST00000535094 PPYP01298 95 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 MSX1P28360 303 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 GAMTQ14353 236 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 PYY3Q5JQD4 70 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 PHYHD1Q5SRE7 291 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 MYPOPQ86VE0 399 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-232ENST00000535094 RASL10BQ96S79 203 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 PLEKHF2Q9H8W4 249 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 THADAQ6YHU6 1953 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-232ENST00000535094 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-232ENST00000535094 MPPED1O15442 326 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 CYTIPO60759 359 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 HOXB1P14653 301 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-232ENST00000535094 IL13RA2Q14627 380 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 GAPTQ8N292 157 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 POC1BQ8TC44 478 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 RBMXL1Q96E39 390 aaKnown RBP13.82□□□□□ -0.2
MCF2L-232ENST00000535094 FSCN3Q9NQT6 498 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 GDF9O60383 454 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 PIAS2O75928 621 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 METTL15P1P0C7V9 234 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 PRF1P14222 555 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 SPANXN5Q5MJ07 72 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 TCEAL6Q6IPX3 200 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 VASH2Q86V25 355 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 C1orf87Q8N0U7 546 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 TMEM252Q8N6L7 170 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 Q8WTZ3 238 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 EXTL1Q92935 676 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 RSG1Q9BU20 258 aa13.82□□□□□ -0.2
MCF2L-232ENST00000535094 CNOT1A5YKK6 2376 aaKnown RBP13.82□□□□□ -0.2
MCF2L-232ENST00000535094 IGSF23A1L1A6 192 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CD200P41217 278 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 ZNF787Q6DD87 383 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 TMED3Q9Y3Q3 217 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 PI4KAP42356 2102 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 A0A087X0M5 115 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 A0A1B0GX30 115 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 C3orf80F5H4A9 247 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CXCL1P09341 107 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CFHR1Q03591 330 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 SSX2Q16385 188 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 LYPD6Q86Y78 171 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 Q96M66 194 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CCL28Q9NRJ3 127 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 PPP1R3CQ9UQK1 317 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 LAMP3Q9UQV4 416 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 MTCH2Q9Y6C9 303 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 DOCK10Q96BY6 2186 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 FER1L5A0AVI2 2057 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CD300LBA8K4G0 201 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CXCL13O43927 109 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 IFNA10P01566 189 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 SUMO3P55854 103 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-232ENST00000535094 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-232ENST00000535094 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 ZNF611Q8N823 705 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 SNIP1Q8TAD8 396 aaKnown RBP13.81□□□□□ -0.2
MCF2L-232ENST00000535094 CA5BP1Q8WTZ4 195 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 TMEM37Q8WXS4 190 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 FRZBQ92765 325 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 TINAGQ9UJW2 476 aa13.81□□□□□ -0.2
MCF2L-232ENST00000535094 NPBWR2P48146 333 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 CEACAM16Q2WEN9 425 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 ZNF665Q9H7R5 613 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 C2orf16Q68DN1 1984 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 YKT6O15498 198 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 PGA5P0DJD9 388 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 OR2M3Q8NG83 312 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 EDARADDQ8WWZ3 215 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-232ENST00000535094 OR5B12Q96R08 314 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 HDGFL3Q9Y3E1 203 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 REV3LO60673 3130 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 A0A1W2PPQ1 181 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 BCAT2O15382 392 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-232ENST00000535094 FUT3P21217 361 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 GPM6AP51674 278 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 D2HGDHQ8N465 521 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 OR1K1Q8NGR3 316 aa13.8□□□□□ -0.2
MCF2L-232ENST00000535094 SHISA7A6NL88 538 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 WDR1O75083 606 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 SCTP09683 121 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 OTX2P32243 289 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 CDX1P47902 265 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-232ENST00000535094 HLA-DRB3P79483 266 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 TRANK1O15050 2925 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 PDCD6O75340 191 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 FOLR2P14207 255 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 GLB1P16278 677 aa13.79□□□□□ -0.2
MCF2L-232ENST00000535094 MRPL21Q7Z2W9 205 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms