RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 LYSMD2Q8IV50 215 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 PACRGQ96M98 296 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-232ENST00000532649 FAAP24Q9BTP7 215 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 GHITMQ9H3K2 345 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 A0A1W2PPQ1 181 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 CTLA4P16410 223 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 SLC35B1P78383 322 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 C19orf57Q0VDD7 668 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OR13G1Q8NGZ3 307 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ZNF721Q8TF20 911 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 TMEM171Q8WVE6 324 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 DERL3Q96Q80 235 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ZNF426Q9BUY5 554 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 MAGT1Q9H0U3 335 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 FLRT3Q9NZU0 649 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ANXA10Q9UJ72 324 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 FOXJ3Q9UPW0 622 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 TRAV38-1A0A0B4J264 116 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 H3BMH7 237 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 MPZL1O95297 269 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 KRASP01116 189 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 FCN2Q15485 313 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ATG4DQ86TL0 474 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-232ENST00000532649 LIPT2A6NK58 231 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OPN1MWP04001 364 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 CEBPDP49716 269 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-232ENST00000532649 NAAAQ02083 359 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OR6X1Q8NH79 312 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 LRRC29Q8WV35 223 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ASB10Q8WXI3 467 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 SPSB1Q96BD6 273 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 WDR13Q9H1Z4 485 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 CXXC4Q9H2H0 198 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 DTX4Q9Y2E6 619 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 IGKV1-8A0A0C4DH67 115 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 M0R3E3 92 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 LANCL1O43813 399 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 NQO2P16083 231 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 LTBRP36941 435 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 OR2B8PP59922 312 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 SLC25A35Q3KQZ1 300 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 MOGAT2Q3SYC2 334 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 PET117Q6UWS5 81 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 C12orf57Q99622 126 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 SLC25A32Q9H2D1 315 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 ZNF256Q9Y2P7 627 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-232ENST00000532649 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 RHBDL1O75783 438 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 NGFP01138 241 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 ORM2P19652 201 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 HRH1P35367 487 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 CLEC12BQ2HXU8 276 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 FAAP20Q6NZ36 180 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 NUFIP2Q7Z417 695 aaKnown RBP7.71□□□□□ -1.17
CTNND1-232ENST00000532649 C2orf50Q96LR7 162 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 DOK5Q9P104 306 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 WASHC3Q9Y3C0 194 aa7.71□□□□□ -1.17
CTNND1-232ENST00000532649 GNG7O60262 68 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 DHRS3O75911 302 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 HMGA2P52926 109 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SKP2Q13309 424 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 COL19A1Q14993 1142 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 EBLN2Q6P2I7 272 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 LSMEM1Q8N8F7 131 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SLC26A10Q8NG04 563 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 YIPF6Q96EC8 236 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 ZNF552Q9H707 407 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-232ENST00000532649 ADGRL4Q9HBW9 690 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 A0A1B0GVG6 124 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 FUCA1P04066 466 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 LIFP15018 202 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SLC23A3Q6PIS1 610 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 TEX261Q6UWH6 196 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 PDPNQ86YL7 162 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SYT8Q8NBV8 401 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SGK494Q96LW2 274 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 DDA1Q9BW61 102 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 HEXA-AS1Q9H8Q6 139 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 LYRM2Q9NU23 88 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-232ENST00000532649 PSG11Q9UQ72 335 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 TRAV1-2A0A0B4J238 106 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SULT1A2P50226 295 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 MYOZ3Q8TDC0 251 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 OR10C1Q96KK4 312 aa7.71□□□□□ -1.18
CTNND1-232ENST00000532649 SF3B5Q9BWJ5 86 aaKnown RBP7.71□□□□□ -1.18
CTNND1-232ENST00000532649 MYOFQ9NZM1 2061 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 WISP3O95389 354 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-232ENST00000532649 CELA2AP08217 269 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 ADRB1P08588 477 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 GIPP09681 153 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-232ENST00000532649 PRF1P14222 555 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 PI3P19957 117 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 VDAC1P21796 283 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 ACAA2P42765 397 aaKnown RBP7.7□□□□□ -1.18
CTNND1-232ENST00000532649 SRSF9Q13242 221 aaKnown RBP eCLIP7.7□□□□□ -1.18
CTNND1-232ENST00000532649 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 ZNF519Q8TB69 540 aa7.7□□□□□ -1.18
CTNND1-232ENST00000532649 ABHD3Q8WU67 409 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms