RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NMNAT2Q9BZQ4 307 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 OR51J1Q9H342 316 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 EGLN3Q9H6Z9 239 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 GPR173Q9NS66 373 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 MRGBPQ9NV56 204 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 IL36RNQ9UBH0 155 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 ENPP5Q9UJA9 477 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 ZNF580Q9UK33 172 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 STUB1Q9UNE7 303 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 PIGLQ9Y2B2 252 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 CEPT1Q9Y6K0 416 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 CDH10Q9Y6N8 788 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 U3KQV3 271 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 PKD1P98161 4303 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 IGHV4OR15-8A0A075B7B6 117 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 A0A087WW49 117 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 F8VVB4 439 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 F8VWA3 439 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 MRASO14807 208 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 MGST3O14880 152 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 DIRAS1O95057 198 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 OR5H8P0DN80 308 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 ATP6V1B1P15313 513 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 ERP29P30040 261 aaKnown RBP6.29□□□□□ -1.4
CD44-232ENST00000531118 PTGFRP43088 359 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 GSSP48637 474 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 PRRX1P54821 245 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 ZP1P60852 638 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 RIPPLY1Q0D2K3 151 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 IL24Q13007 206 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 KPNB1Q14974 876 aaKnown RBP6.29□□□□□ -1.4
CD44-232ENST00000531118 SLX4IPQ5VYV7 408 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 TMEM65Q6PI78 240 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 ASRGL1Q7L266 308 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 OR8H3Q8N146 312 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 OR8D4Q8NGM9 314 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 OR9G1Q8NH87 305 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 CEP19Q96LK0 163 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 TMED9Q9BVK6 235 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 PKIBQ9C010 78 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 KLK15Q9H2R5 256 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 TUBA4BQ9H853 241 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 TAS2R3Q9NYW6 316 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 NDUFAF4Q9P032 175 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 DNAJB9Q9UBS3 223 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 SLC7A11Q9UPY5 501 aa6.29□□□□□ -1.4
CD44-232ENST00000531118 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 A0A0U1RQV5 110 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 NCBP2LA6PVI3 153 aaKnown RBP6.28□□□□□ -1.4
CD44-232ENST00000531118 CXCR6O00574 342 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 HSD17B6O14756 317 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 NRASP01111 189 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 IGLV3-1P01715 115 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 IGF1P05019 195 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 LYNP07948 512 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 RHCEP18577 417 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 RAB7AP51149 207 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 BLVRAP53004 296 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 MADCAM1Q13477 382 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 EBI3Q14213 229 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 COQ5Q5HYK3 327 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 TMEM42Q69YG0 159 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 SHFQ7M4L6 423 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.28□□□□□ -1.4
CD44-232ENST00000531118 SLC15A3Q8IY34 581 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 OR4D6Q8NGJ1 314 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 STON2Q8WXE9 905 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 EMG1Q92979 244 aaKnown RBP6.28□□□□□ -1.4
CD44-232ENST00000531118 SLAMF9Q96A28 289 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 THAP7Q9BT49 309 aaPredicted RBP6.28□□□□□ -1.4
CD44-232ENST00000531118 CCDC134Q9H6E4 229 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 GPR84Q9NQS5 396 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 FAM206AQ9NX38 181 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 CHCHD3Q9NX63 227 aaKnown RBP6.28□□□□□ -1.4
CD44-232ENST00000531118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.28□□□□□ -1.4
CD44-232ENST00000531118 FAM32AQ9Y421 112 aaKnown RBP6.28□□□□□ -1.4
CD44-232ENST00000531118 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
CD44-232ENST00000531118 IGHV3-72A0A0B4J1Y9 119 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 FAM183AA6NL82 134 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 BBIP1A8MTZ0 92 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 J3QR06 171 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 MPZL2O60487 215 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 DHRS3O75911 302 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 LGALS1P09382 135 aaKnown RBP6.27□□□□□ -1.41
CD44-232ENST00000531118 NFYBP25208 207 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
CD44-232ENST00000531118 TSPAN31Q12999 210 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 KLF10Q13118 480 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 CLVS2Q5SYC1 327 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 METTL21CQ5VZV1 264 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 STEAP3Q658P3 488 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 RPL13AP3Q6NVV1 102 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 LINC00322Q6ZN03 302 aaPredicted RBP6.27□□□□□ -1.41
CD44-232ENST00000531118 GTSCR1Q86UQ5 136 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 ANGPTL5Q86XS5 388 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 ANKRD13BQ86YJ7 626 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 OTOSQ8NHW6 89 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 OR51E1Q8TCB6 317 aa6.27□□□□□ -1.41
CD44-232ENST00000531118 CORO2AQ92828 525 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms