RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TP53TG3Q9ULZ0 132 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 IGLV1-36A0A0B4J1U3 117 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 DUXBA0A1W2PPF3 345 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 VSTM2BA6NLU5 285 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SERPINE3A8MV23 424 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 J3QR06 171 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 RAMP3O60896 148 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 TNFSF15O95150 251 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SCGB1A1P11684 91 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 CDKN1AP38936 164 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 RPS27P42677 84 aaKnown RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ADIRFQ15847 76 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF440Q8IYI8 595 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM123Q8N131 208 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 RAB42Q8N4Z0 105 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM252Q8N6L7 170 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 KLHDC1Q8N7A1 406 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ATP5SQ99766 215 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 VN1R1Q9GZP7 353 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SLC35D1Q9NTN3 355 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 TRAPPC1Q9Y5R8 145 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SPEGQ15772 3267 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 PTPRSQ13332 1948 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 LTBP2Q14767 1821 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 PRRT4C9JH25 899 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 PIAS2O75928 621 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 IL3RAP26951 378 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 CST5P28325 142 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 RPL18Q07020 188 aaKnown RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 NFATC4Q14934 902 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 PSG3Q16557 428 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM41BQ5BJD5 291 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 LDLRAD2Q5SZI1 272 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF787Q6DD87 383 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 COX15Q7KZN9 410 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 OR5AU1Q8NGC0 362 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 NT5CQ8TCD5 201 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 LOXL4Q96JB6 756 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 PSMG3Q9BT73 122 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 S1PR5Q9H228 398 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 CHODLQ9H9P2 273 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 RBM7Q9Y580 266 aaKnown RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ADAMTS9Q9P2N4 1935 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 CACNA1IQ9P0X4 2223 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 IGLC7A0M8Q6 106 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SDCBPO00560 298 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 IGKV1D-16P01601 117 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 HPNP05981 417 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 TUBG1P23258 451 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 Q0VG73 95 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 MRPL49Q13405 166 aaKnown RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SMIM21Q3B7S5 101 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SPATA45Q537H7 98 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 LRRC10Q5BKY1 277 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 LYZL2Q7Z4W2 148 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ATG4DQ86TL0 474 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-214ENST00000530886 VN1R17PQ8TDU5 208 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 SSC4DQ8WTU2 575 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ARRDC3Q96B67 414 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 ARHGAP5-AS1Q96IT6 56 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 RAB11FIP5Q9BXF6 653 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 CLN8Q9UBY8 286 aa7.06□□□□□ -1.28
CSDE1-214ENST00000530886 LRP4O75096 1905 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 SPTBN5Q9NRC6 3674 aaKnown RBP7.05□□□□□ -1.28
CSDE1-214ENST00000530886 CHD3Q12873 2000 aaKnown RBP7.05□□□□□ -1.28
CSDE1-214ENST00000530886 FAM24AA6NFZ4 105 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 HIDE1A8MVS5 230 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 LMX1BO60663 402 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 GABRA3P34903 492 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF93P35789 620 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-214ENST00000530886 WASP42768 502 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 SUMO1P63165 101 aaKnown RBP7.05□□□□□ -1.28
CSDE1-214ENST00000530886 PRICKLE4Q2TBC4 344 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 UNQ5815/PRO19632Q6UWF5 114 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 PARS2Q7L3T8 475 aaKnown RBP7.05□□□□□ -1.28
CSDE1-214ENST00000530886 CMTM8Q8IZV2 173 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 OR5D14Q8NGL3 314 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 OR4S2Q8NH73 311 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM234Q8WY98 164 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM59Q9BXS4 323 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 MRPS28Q9Y2Q9 187 aaKnown RBP7.05□□□□□ -1.28
CSDE1-214ENST00000530886 PPIAL4AQ9Y536 164 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 TRAV9-1A0A075B6T8 112 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 SAA2-SAA4A0A096LPE2 208 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 GRXCR1A8MXD5 290 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 TSPOP30536 169 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 BIDP55957 195 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 PIGPP57054 158 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 SRPXP78539 464 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 PET117Q6UWS5 81 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 Q6ZN92 141 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 OR5C1Q8NGR4 320 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 HSPB9Q9BQS6 159 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 EMC9Q9Y3B6 208 aa7.05□□□□□ -1.28
CSDE1-214ENST00000530886 H7C1C5 153 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 MLNRO43193 412 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 IGHMP01871 453 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms