RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TBPL2Q6SJ96 375 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 CD164L2Q6UWJ8 174 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 LYPD2Q6UXB3 125 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF841Q6ZN19 808 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 DPY19L2P2Q6ZN68 376 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 HIST2H3AQ71DI3 136 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 PGAP1Q75T13 922 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 MRPL21Q7Z2W9 205 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 RTN4RL2Q86UN3 420 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SPRYD4Q8WW59 207 aaPredicted RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ATF6BQ99941 703 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 RBM4BQ9BQ04 359 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 WDR76Q9H967 626 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC35D1Q9NTN3 355 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 UFSP2Q9NUQ7 469 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 ACOXLQ9NUZ1 547 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 GAB2Q9UQC2 676 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 TCF19Q9Y242 345 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 SIGLEC7Q9Y286 467 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 FAM32AQ9Y421 112 aaKnown RBP4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 IER3IP1Q9Y5U9 82 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 LHFPL6Q9Y693 200 aa4.11□□□□□ -1.75
AMBRA1-209ENST00000529963 IGHV1-69DA0A0B4J2H0 117 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CENPVL3A0A0U1RRI6 287 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 LOC100653049A0A140TA62 436 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 A0A1W2PN81 502 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 BTBD17A6NE02 478 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 F5H5K5 113 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CXCR6O00574 342 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 IMPA2O14732 288 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 PIN1P1O15428 100 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 GMDSO60547 372 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 KRT34O76011 436 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CLPXO76031 633 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 PTBP3O95758 552 aaKnown RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 TXNDC12O95881 172 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 ECDO95905 644 aaPredicted RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 RENP00797 406 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 IGHV1-69P01742 117 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 APOHP02749 345 aaPredicted RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 ACSM4P0C7M7 580 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 GGT2P36268 569 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CHRNA7P36544 502 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 MDH1P40925 334 aaKnown RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 LIPEQ05469 1076 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 DGCR6Q14129 220 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 GK2Q14410 553 aaPredicted RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 TAF9Q16594 264 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 KRTAP27-1Q3LI81 207 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 KIAA1644Q3SXP7 199 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 FGD3Q5JSP0 725 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 VAX1Q5SQQ9 334 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 PRAMEF6Q5VXH4 476 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 ASPHD2Q6ICH7 369 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SMARCD3Q6STE5 483 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 GDPGP1Q6ZNW5 385 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC16A9Q7RTY1 509 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 PRSS35Q8N3Z0 413 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SPERTQ8NA61 448 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 C19orf18Q8NEA5 215 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 FANK1Q8TC84 345 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC7A13Q8TCU3 470 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 PHLDA1Q8WV24 401 aaPredicted RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 LHX4Q969G2 390 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SPTSSAQ969W0 71 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 TBX15Q96SF7 602 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 PITX2Q99697 317 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SPAG8Q99932 426 aaPredicted RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 ADAT1Q9BUB4 502 aaKnown RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 SAR1AQ9NR31 198 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CMTM6Q9NX76 183 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CTSZQ9UBR2 303 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 STUB1Q9UNE7 303 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 CAB39Q9Y376 341 aaPredicted RBP4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 ENPP4Q9Y6X5 453 aa4.1□□□□□ -1.75
AMBRA1-209ENST00000529963 IGLV1-36A0A0B4J1U3 117 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 GGT3PA6NGU5 568 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 CD300LBA8K4G0 201 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 M0R135 149 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 NDUFAB1O14561 156 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 SERPINA1P01009 418 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 IGHV4-59P01825 116 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 FBP1P09467 338 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 CA6P23280 308 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 OMPP47874 163 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 OR3A3P47888 321 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 ARF6P62330 175 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 MPPED2Q15777 294 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF876PQ49A33 203 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 FFAR4Q5NUL3 377 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 OR6V1Q8N148 313 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 SLC26A10Q8NG04 563 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 OR4C15Q8NGM1 316 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 LINC01006Q8NI28 216 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 RFT1Q96AA3 541 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 RCN3Q96D15 328 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 ZNF799Q96GE5 643 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 ERMAPQ96PL5 475 aaPredicted RBP4.09□□□□□ -1.75
AMBRA1-209ENST00000529963 HOPXQ9BPY8 73 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms