RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 GSTT1P30711 240 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 BRS3P32247 399 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GDNFP39905 211 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 HCCSP53701 268 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 PSMA6P60900 246 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ESRRGP62508 458 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TSPAN31Q12999 210 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 IL18R1Q13478 541 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 HES1Q14469 280 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 C2orf76Q3KRA6 126 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TEX30Q5JUR7 227 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CLVS2Q5SYC1 327 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 C9orf66Q5T8R8 295 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CGB2Q6NT52 195 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CALHM1Q8IU99 346 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ABHD12Q8N2K0 398 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF680Q8NEM1 530 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 OR5M8Q8NGP6 311 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 OR51E1Q8TCB6 317 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RFKQ969G6 155 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RBMXL1Q96E39 390 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TMEM68Q96MH6 324 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 BTBD10Q9BSF8 475 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SPXQ9BT56 116 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 NMNAT2Q9BZQ4 307 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 C6orf62Q9GZU0 229 aaPredicted RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 OR51V1Q9H2C8 321 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF286AQ9HBT8 521 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SPACA1Q9HBV2 294 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GPR84Q9NQS5 396 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 NUDT15Q9NV35 164 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ING3Q9NXR8 418 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RASL12Q9NYN1 266 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 DPM3Q9P2X0 92 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 MOB4Q9Y3A3 225 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 LYVE1Q9Y5Y7 322 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 HSPE1-MOB4S4R3N1 261 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 DNAH11Q96DT5 4516 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 PKHD1P08F94 4074 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 FAM230AA0A1W2PPH8 454 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 hADV38S2A0JD32 116 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PGPEP1LA6NFU8 196 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PRR32B1ATL7 298 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 RBP4P02753 201 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 MRPL3P09001 348 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 HOXB6P17509 224 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 CDK2P24941 298 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 NUP62P37198 522 aaPredicted RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 IFNGR2P38484 337 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 RIPPLY1Q0D2K3 151 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 GRK1Q15835 563 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF684Q5T5D7 378 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 TPTE2P1Q5T6R2 138 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 METTL21CQ5VZV1 264 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 GLYATQ6IB77 296 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 TRPM8Q7Z2W7 1104 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ARPINQ7Z6K5 226 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OR52N4Q8NGI2 321 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OR5A2Q8NGI9 324 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OR56B4Q8NH76 319 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 LEAP2Q969E1 77 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SLAMF9Q96A28 289 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ANAPC16Q96DE5 110 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OPALINQ96PE5 141 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OR5B12Q96R08 314 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 TEAD3Q99594 435 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 YIPF3Q9GZM5 350 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 MRPL18Q9H0U6 180 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 DCLRE1BQ9H816 532 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ZMAT4Q9H898 229 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 DCAF13Q9NV06 445 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 AASSQ9UDR5 926 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SAMD4AQ9UPU9 718 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 GAB2Q9UQC2 676 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 POLDIP2Q9Y2S7 368 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 U3KQV3 271 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PQLC2LA1A4F0 135 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ARRDC5A6NEK1 342 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 RIIAD1A6NNX1 92 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 LEUTXA8MZ59 168 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SIRPB1O00241 398 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 MAGEB4O15481 346 aaPredicted RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PSPNO60542 156 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 NRASP01111 189 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 GASTP01350 101 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 IFNGP01579 166 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SEMG1P04279 462 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 FABP3P05413 133 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 HCKP08631 526 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 COX4I1P13073 169 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PTBP1P26599 531 aaKnown RBP eCLIP2.76□□□□□ -1.971e-6■■■■□ 23.8
PTPRC-213ENST00000529828 SMIM11AP58511 58 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PSME3P61289 254 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SLC35B1P78383 322 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 MFGE8Q08431 387 aaPredicted RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 DIAPH2-AS1Q14236 149 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SRSF7Q16629 238 aaKnown RBP eCLIP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SAMD4BQ5PRF9 694 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 FAM53AQ6NSI3 398 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms