RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	OR2C3	Q8N628	320 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	SFT2D1	Q8WV19	159 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	EXTL1	Q92935	676 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	C14orf79	Q96F83	325 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	SPIN2A	Q99865	258 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	SPIN2B	Q9BPZ2	258 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	SH3BGRL3	Q9H299	93 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	RPS10P5	Q9NQ39	176 aa		20.14	■□□□□ 0.81
GSDMD-208	ENST00000528475	IGKV3D-15	A0A087WSY6	115 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475		K7N7A8	449 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	TDGF1	P13385	188 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	AWAT1	Q58HT5	328 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	ABHD3	Q8WU67	409 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	HIST1H2BA	Q96A08	127 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	C12orf57	Q99622	126 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	USB1	Q9BQ65	265 aa	Known RBP	20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	PBDC1	Q9BVG4	233 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475		Q9N2K0	584 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	TCFL5	Q9UL49	500 aa		20.13	■□□□□ 0.81
GSDMD-208	ENST00000528475	DUXB	A0A1W2PPF3	345 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	LINC01387	J3KSC0	135 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	NAPSA	O96009	420 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	PRH1	P02810	166 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	PTAFR	P25105	342 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	OTX2	P32243	289 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	MEX3B	Q6ZN04	569 aa	Known RBP	20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	ETV3L	Q6ZN32	361 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	C2CD4C	Q8TF44	421 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	REPIN1	Q9BWE0	567 aa	Known RBP	20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	C7orf77	A4D0Y5	90 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	NKX2-6	A6NCS4	301 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	PCP4L1	A6NKN8	68 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	CER1	O95813	267 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	MT-ND4L	P03901	98 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	GDF1	P27539	372 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	FHIT	P49789	147 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	FGF12	P61328	243 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZNF266	Q14584	549 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	HSD17B11	Q8NBQ5	300 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZNF845	Q96IR2	970 aa	Predicted RBP	20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	EIF5A2	Q9GZV4	153 aa	Known RBP	20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	SMDT1	Q9H4I9	107 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	SPACA1	Q9HBV2	294 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	SLC7A10	Q9NS82	523 aa		20.12	■□□□□ 0.81
GSDMD-208	ENST00000528475	SDK2	Q58EX2	2172 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	CLEC18A	A5D8T8	446 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	PITX3	O75364	302 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	NKX2-1	P43699	371 aa	Predicted RBP	20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	RPS18	P62269	152 aa	Known RBP	20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	TBC1D26	Q86UD7	250 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	CLEC18C	Q8NCF0	446 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	MAFA	Q8NHW3	353 aa	Predicted RBP	20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	TAAR9	Q96RI9	348 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	SERPINA7	P05543	415 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	CYB561	P49447	251 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	FOXO1	Q12778	655 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	SELENOH	Q8IZQ5	122 aa	Known RBP	20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZFP82	Q8N141	532 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	OR8G5	Q8NG78	346 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	SLC39A7	Q92504	469 aa		20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	NOSIP	Q9Y314	301 aa	Known RBP	20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	UBE2J1	Q9Y385	318 aa	Predicted RBP	20.11	■□□□□ 0.81
GSDMD-208	ENST00000528475	PINLYP	A6NC86	204 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	C1orf196	B1AJZ1	125 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	PDGFB	P01127	241 aa	Predicted RBP	20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	TK1	P04183	234 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	COX5B	P10606	129 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	BCL3	P20749	454 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	SSPN	Q14714	243 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	MPV17L	Q2QL34	196 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZNF695	Q8IW36	515 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	OR56B2P	Q8NGI1	322 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	SLC35B3	Q9H1N7	401 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	PLEKHF2	Q9H8W4	249 aa		20.1	■□□□□ 0.81
GSDMD-208	ENST00000528475	PATE3	B3GLJ2	98 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	MRPL33	O75394	65 aa	Known RBP	20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	C1QL1	O75973	258 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	MEOX2	P50222	304 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	PRDX4	Q13162	271 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	PAPOLG	Q9BWT3	736 aa	Known RBP	20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	FGF23	Q9GZV9	251 aa	Predicted RBP	20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	SLC25A31	Q9H0C2	315 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	FAM24A	A6NFZ4	105 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	UMAD1	C9J7I0	102 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	TUSC2	O75896	110 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	SNRNP70	P08621	437 aa	Known RBP	20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	MMP9	P14780	707 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	NOVA1	P51513	510 aa	Known RBP	20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	CTAG1A	P78358	180 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	RHEB	Q15382	184 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	DCAF12	Q5T6F0	453 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZNF565	Q8N9K5	539 aa		20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	LYRM2	Q9NU23	88 aa	Predicted RBP	20.09	■□□□□ 0.81
GSDMD-208	ENST00000528475	IGSF23	A1L1A6	192 aa		20.08	■□□□□ 0.81
GSDMD-208	ENST00000528475	CTXN2	P0C2S0	81 aa		20.08	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZNF44	P15621	663 aa		20.08	■□□□□ 0.81
GSDMD-208	ENST00000528475	ARF1	P84077	181 aa	Known RBP	20.08	■□□□□ 0.81
GSDMD-208	ENST00000528475	ZXDA	P98168	799 aa		20.08	■□□□□ 0.81
GSDMD-208	ENST00000528475	CEACAM21	Q3KPI0	293 aa		20.08	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms