RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 GPX5O75715 221 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 LALBAP00709 142 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 ARG1P05089 322 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 CD1AP06126 327 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 RIPK1Q13546 671 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 Q499Y3 187 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 MINOS1Q5TGZ0 78 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 ASPHD2Q6ICH7 369 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 Q6P435 159 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 ASCL4Q6XD76 172 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 SATL1Q86VE3 508 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 TPRX1Q8N7U7 411 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 OR51A2Q8NGJ7 313 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 OR51T1Q8NGJ9 327 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 LINC01006Q8NI28 216 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 TAF15Q92804 592 aaKnown RBP eCLIP16.74■□□□□ 0.27
VPS28-206ENST00000526734 CDCA4Q9BXL8 241 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 PCDHB16Q9NRJ7 776 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 PAK1IP1Q9NWT1 392 aaPredicted RBP16.74■□□□□ 0.27
VPS28-206ENST00000526734 IL36GQ9NZH8 169 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 RNF114Q9Y508 228 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 MINOS1-NBL1R4GNA1 71 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 SLC33A1O00400 549 aaPredicted RBP16.73■□□□□ 0.27
VPS28-206ENST00000526734 XPNPEP2O43895 674 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 FSTP19883 344 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 BDKRB2P30411 391 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 KCNJ3P48549 501 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 WNT4P56705 351 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 RSU1Q15404 277 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 DDI2Q5TDH0 399 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 Q6ZSV7 163 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 AHSA2Q719I0 299 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 C17orf50Q8WW18 174 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 FAM192AQ9GZU8 254 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 TMEM133Q9H2Q1 129 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 PPA2Q9H2U2 334 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 NCOR1P1Q9H4R4 102 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 RANBP3Q9H6Z4 567 aaPredicted RBP16.73■□□□□ 0.27
VPS28-206ENST00000526734 OR6C3Q9NZP0 311 aa16.73■□□□□ 0.27
VPS28-206ENST00000526734 ODAMA1E959 279 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 ZNF780AO75290 641 aaPredicted RBP16.72■□□□□ 0.27
VPS28-206ENST00000526734 ZNF93P35789 620 aaPredicted RBP16.72■□□□□ 0.27
VPS28-206ENST00000526734 PTGFRP43088 359 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 BDH1Q02338 343 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 SCN1BQ07699 218 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 NHLRC3Q5JS37 347 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 LAIR2Q6ISS4 152 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 C11orf88Q6PI97 169 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 HEPN1Q6WQI6 88 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 RTN4RL2Q86UN3 420 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 BPIFB6Q8NFQ5 453 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 PGLYRP3Q96LB9 341 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 S100A13Q99584 98 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 CLEC7AQ9BXN2 247 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 METTL9Q9H1A3 318 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 FKBP14Q9NWM8 211 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 ERGIC3Q9Y282 383 aa16.72■□□□□ 0.27
VPS28-206ENST00000526734 IGHV2-26A0A0B4J1V2 119 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 IGFBP3P17936 291 aaPredicted RBP16.71■□□□□ 0.27
VPS28-206ENST00000526734 DYNLT3P51808 116 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 PAX5Q02548 391 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 AESQ08117 197 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 DYNC1I2Q13409 638 aaKnown RBP16.71■□□□□ 0.27
VPS28-206ENST00000526734 KRBOX4Q5JUW0 171 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 RNLSQ5VYX0 342 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 LINC00596Q86U02 117 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 ABCB10Q9NRK6 738 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 PITPNC1Q9UKF7 332 aa16.71■□□□□ 0.27
VPS28-206ENST00000526734 MEX3AA1L020 520 aaKnown RBP16.7■□□□□ 0.26
VPS28-206ENST00000526734 ZNF729A6NN14 1252 aaPredicted RBP16.7■□□□□ 0.26
VPS28-206ENST00000526734 CSTBP04080 98 aaKnown RBP16.7■□□□□ 0.26
VPS28-206ENST00000526734 MAPK3P27361 379 aaPredicted RBP16.7■□□□□ 0.26
VPS28-206ENST00000526734 GLIPR1P48060 266 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 PROK1P58294 105 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 RPS11P62280 158 aaKnown RBP eCLIP16.7■□□□□ 0.26
VPS28-206ENST00000526734 PAN3Q58A45 887 aaKnown RBP16.7■□□□□ 0.26
VPS28-206ENST00000526734 BRICD5Q6PL45 260 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 LHFPL4Q7Z7J7 247 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 CDH26Q8IXH8 852 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 OR4C13Q8NGP0 309 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 ZNF596Q8TC21 504 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 CITED1Q99966 193 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 VCX3BQ9H321 246 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 IFT22Q9H7X7 185 aa16.7■□□□□ 0.26
VPS28-206ENST00000526734 TRBV5-7A0A0A0MS05 114 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 CD34P28906 385 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 C21orf33P30042 268 aaPredicted RBP16.69■□□□□ 0.26
VPS28-206ENST00000526734 OR3A4PP47883 348 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 GPR176Q14439 515 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 ATXN7L3Q14CW9 347 aaPredicted RBP16.69■□□□□ 0.26
VPS28-206ENST00000526734 OSR2Q8N2R0 312 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 NANOGP1Q8N7R0 232 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 ZFP41Q8N8Y5 198 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 OR4D6Q8NGJ1 314 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 OR13C5Q8NGS8 318 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 MYDGFQ969H8 173 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 CREB3L1Q96BA8 519 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 COQ2Q96H96 371 aa16.69■□□□□ 0.26
VPS28-206ENST00000526734 NR1H4Q96RI1 486 aaPredicted RBP16.69■□□□□ 0.26
VPS28-206ENST00000526734 ZNF184Q99676 751 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms