RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 IGKV1-12A0A0C4DH73 117 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 DHRS7CA6NNS2 312 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 HAND1O96004 215 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 IGKV1D-12P01611 117 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 OR2T7P0C7T2 308 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 BCL3P20749 454 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 AZGP1P25311 298 aaKnown RBP11.31□□□□□ -0.6
CPSF1-201ENST00000526271 MED21Q13503 144 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 ODF4Q2M2E3 257 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 BCL2L15Q5TBC7 163 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 SLC25A26Q70HW3 274 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 GDPD3Q7L5L3 318 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 CENPVQ7Z7K6 275 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-201ENST00000526271 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 PRSS35Q8N3Z0 413 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 BPIFB6Q8NFQ5 453 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 NDNFQ8TB73 568 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 ASB17Q8WXJ9 295 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 WWC2-AS2Q96NR7 200 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
CPSF1-201ENST00000526271 LIN7BQ9HAP6 207 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 SEBOXQ9HB31 216 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-201ENST00000526271 FKBP14Q9NWM8 211 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 PSORS1C1Q9UIG5 152 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 GTF2A1LQ9UNN4 478 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 TMEM14AQ9Y6G1 99 aa11.31□□□□□ -0.6
CPSF1-201ENST00000526271 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 PEX14O75381 377 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 OR2F2O95006 317 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 PF4P02776 101 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 CCDC159P0C7I6 412 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 ATP6V1E1P36543 226 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 KIR3DL2P43630 455 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 BDH1Q02338 343 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 GRK1Q15835 563 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 OR52I1Q8NGK6 324 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 COQ2Q96H96 371 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 ZNF649Q9BS31 505 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 JAM3Q9BX67 310 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 CHST5Q9GZS9 411 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPSF1-201ENST00000526271 CNOT2Q9NZN8 540 aaKnown RBP11.3□□□□□ -0.6
CPSF1-201ENST00000526271 DPM3Q9P2X0 92 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 MYRFQ9Y2G1 1151 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 LYSTQ99698 3801 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 STARD9Q9P2P6 4700 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 CSMD3Q7Z407 3707 aa11.3□□□□□ -0.6
CPSF1-201ENST00000526271 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A18PA6NE21 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A16PA6NEW6 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A20PA6NIJ5 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A9PA6NNJ1 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A12PA8MX19 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A5PA8MXJ8 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 RPP14O95059 124 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 APOL3O95236 402 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FADS2O95864 444 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 SNRNP70P08621 437 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A15PP0C7V4 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A13PP0C7W8 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A14PP0C7W9 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 FAM90A24PP0C7X0 464 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 HTR1DP28221 377 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 CD34P28906 385 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 GLIPR1P48060 266 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 THBS3P49746 956 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 SNU13P55769 128 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 P2RX3P56373 397 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 DIAPH2-AS1Q14236 149 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 ZNF146Q15072 292 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 C17orf58Q2M2W7 97 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 RBM48Q5RL73 367 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 C16orf82Q7Z2V1 217 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 EGFL6Q8IUX8 553 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 EMG1Q92979 244 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 ADAT3Q96EY9 351 aaPredicted RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 NOL4LQ96MY1 436 aaPredicted RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 YTHDF1Q9BYJ9 559 aaKnown RBP11.29□□□□□ -0.6
CPSF1-201ENST00000526271 DUSP21Q9H596 190 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 MOB1AQ9H8S9 216 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 SNX5Q9Y5X3 404 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
CPSF1-201ENST00000526271 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 A0A1W2PQL4 384 aaPredicted RBP11.28□□□□□ -0.6
CPSF1-201ENST00000526271 EFCAB10A6NFE3 127 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 ZNF670-ZNF695F2Z2N8 137 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 ALDOBP05062 364 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 CGB3P0DN86 165 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 CGB7P0DN87 165 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 CRHBPP24387 322 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 CDK2P24941 298 aa11.28□□□□□ -0.6
CPSF1-201ENST00000526271 DCKP27707 260 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms