RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 TMEM267Q0VDI3 215 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 HIKESHIQ53FT3 197 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 TMEM252Q8N6L7 170 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 OR14L1PQ8NHC6 308 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 GALNT14Q96FL9 552 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 MRGPRX4Q96LA9 322 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 UBE2ZQ9H832 354 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 SLC7A10Q9NS82 523 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 V9GYS6 101 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 C3orf85A0A1B0GTC6 90 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 GATCO43716 136 aaKnown RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 SCAF4O95104 1147 aaKnown RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 NTF4P34130 210 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 HERV-K104P61576 105 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 LSM6P62312 80 aaKnown RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 NKX6-1P78426 367 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 OR2M3Q8NG83 312 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 UBALD1Q8TB05 177 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 PIGCQ92535 297 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 NABP1Q96AH0 204 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 MVB12AQ96EY5 273 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 DOCK7Q96N67 2140 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 RSG1Q9BU20 258 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 STRAPQ9Y3F4 350 aaKnown RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 PPP1R2P9O14990 202 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 F10P00742 488 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 CD63P08962 238 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 SNRPCP09234 159 aaKnown RBP11.37□□□□□ -0.59
CAPN1-202ENST00000524773 B4GALT1P15291 398 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 GPR157Q5UAW9 335 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 RAET1LQ5VY80 246 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 CALHM1Q8IU99 346 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF695Q8IW36 515 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 HIST3H2BBQ8N257 126 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 COMMD1Q8N668 190 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 OR6C1Q96RD1 312 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 MYOTQ9UBF9 498 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 FOXD3Q9UJU5 478 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-202ENST00000524773 R4GN57 208 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 CHD3Q12873 2000 aaKnown RBP11.37□□□□□ -0.59
CAPN1-202ENST00000524773 IGHV1OR15-9A0A0B4J2B8 117 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 IGKV1D-13A0A0B4J2D9 117 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 NPIPB13A6NJU9 1138 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 NPIPB4C9JG80 1138 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 RRP8O43159 456 aaKnown RBP11.37□□□□□ -0.59
CAPN1-202ENST00000524773 IGLV3-19P01714 112 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 IGKV1-13P0DP09 117 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 GNRHRP30968 328 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 RPS18P62269 152 aaKnown RBP11.37□□□□□ -0.59
CAPN1-202ENST00000524773 SSX9Q7RTT3 188 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 FGFBP3Q8TAT2 258 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 BORCS8Q96FH0 119 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF665Q9H7R5 613 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 MPPED1O15442 326 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 CHST1O43916 411 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 PPYP01298 95 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 SCTP09683 121 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 RAB1AP62820 205 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 VAMP2P63027 116 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 IL13RA2Q14627 380 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 HIST3H3Q16695 136 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF818PQ6ZRF7 136 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 SSX7Q7RTT5 188 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 CMTM1Q8IZ96 169 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 GFOD1Q9NXC2 390 aa11.37□□□□□ -0.59
CAPN1-202ENST00000524773 TMEM265A0A087WTH1 108 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 AQP7P3A6NL99 342 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 TNFSF11O14788 317 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 PHOX2AO14813 284 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 SRFP11831 508 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 CCL2P13500 99 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 TUBG1P23258 451 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 C9orf135Q5VTT2 229 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 LRP11Q86VZ4 500 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 GAPTQ8N292 157 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 TSTD1Q8NFU3 115 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 PP6455Q8WZ26 134 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 ULBP2Q9BZM5 246 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 UFSP2Q9NUQ7 469 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 TRAV39A0A0B4J263 110 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 NPIPA2E9PIF3 369 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 LMO7DNF2Z398 122 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 NPIPA3F8WFD2 350 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 IGLV3-1P01715 115 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 CCNOP22674 350 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 ALDH3B1P43353 468 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF133P52736 654 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-202ENST00000524773 SUCLG1P53597 346 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms