RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 APH1BQ8WW43 257 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 RASSF5Q8WWW0 418 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 TESCQ96BS2 214 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 APOL4Q9BPW4 351 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 ZYG11BQ9C0D3 744 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 OR2AG1Q9H205 316 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 DCSTAMPQ9H295 470 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 SYNDIG1Q9H7V2 258 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 FBXL12Q9NXK8 326 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 SCN3BQ9NY72 215 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 IL37Q9NZH6 218 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 VAPAQ9P0L0 249 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 RCL1Q9Y2P8 373 aaKnown RBP3.83□□□□□ -1.8
SKP1-213ENST00000524288 POLR3HQ9Y535 204 aaPredicted RBP3.83□□□□□ -1.8
SKP1-213ENST00000524288 WSB1Q9Y6I7 421 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 CASP8AP2Q9UKL3 1982 aa3.83□□□□□ -1.8
SKP1-213ENST00000524288 PNMA8CA0A1B0GUJ8 204 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 NKX2-6A6NCS4 301 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 NCBP2LA6PVI3 153 aaKnown RBP3.82□□□□□ -1.8
SKP1-213ENST00000524288 EFCAB9A8MZ26 197 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 OTCP00480 354 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 HLA-HP01893 362 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 CDK1P06493 297 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 SPNP16150 400 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 CD36P16671 472 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 PSMB9P28065 219 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 MAP2K4P45985 399 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 TTPAP49638 278 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 DAPP51397 102 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 DEFA1P59665 94 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 DEFA3P59666 94 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 VBP1P61758 197 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 NCS1P62166 190 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 IL5RAQ01344 420 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 RGNQ15493 299 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 TPRG1LQ5T0D9 272 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 ERICH5Q6P6B1 374 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 SBSNQ6UWP8 590 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 CD300LGQ6UXG3 332 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 HDDC2Q7Z4H3 204 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
SKP1-213ENST00000524288 CYP4Z1Q86W10 505 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 ZNF547Q8IVP9 402 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 HS3ST5Q8IZT8 346 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 STK40Q8N2I9 435 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 OR13C4Q8NGS5 318 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 GIMAP1Q8WWP7 306 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 CREB3L1Q96BA8 519 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 APH1AQ96BI3 265 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 ZHX1-C8orf76Q96EF9 292 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 PYURFQ96I23 114 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 RNF170Q96K19 258 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 SDHCQ99643 169 aaPredicted RBP3.82□□□□□ -1.8
SKP1-213ENST00000524288 GPR21Q99679 349 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 RDH14Q9HBH5 336 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 ZNF229Q9UJW7 825 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 TIMM22Q9Y584 194 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 DOCK6Q96HP0 2047 aa3.82□□□□□ -1.8
SKP1-213ENST00000524288 ARPC4-TTLL3A0A0A6YYG9 625 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ARRDC5A6NEK1 342 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 MANBAO00462 879 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CCL22O00626 93 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 PLPP1O14494 284 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ZW10O43264 779 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 FADS2O95864 444 aaKnown RBP3.81□□□□□ -1.8
SKP1-213ENST00000524288 SERPINA1P01009 418 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 HLA-DQB1P01920 261 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 HBE1P02100 147 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CT45A6P0DMU7 189 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CT45A5P0DMU8 189 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CT45A7P0DMV0 189 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 PIPP12273 146 aaPredicted RBP3.81□□□□□ -1.8
SKP1-213ENST00000524288 GPX2P18283 190 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 GADD45AP24522 165 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 F2RP25116 425 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 RCVRNP35243 200 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 GGT2P36268 569 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 RFC3P40938 356 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ARPC4P59998 168 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 GINS1Q14691 196 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CDK10Q15131 360 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CT45A1Q5HYN5 189 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 XKRXQ6PP77 449 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 IGFL2Q6UWQ7 119 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 PAGE2Q7Z2X7 111 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CBLN2Q8IUK8 224 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ENTHD1Q8IYW4 607 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 C8orf31Q8N9H6 132 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 ASCC1Q8N9N2 400 aaKnown RBP3.81□□□□□ -1.8
SKP1-213ENST00000524288 DUSP18Q8NEJ0 188 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 OR10AD1Q8NGE0 317 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 OR10A6Q8NH74 314 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CT45A3Q8NHU0 189 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 GRPEL2Q8TAA5 225 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 TMEM230Q96A57 120 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 BMFQ96LC9 184 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 TAPBPLQ9BX59 468 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 SLC25A2Q9BXI2 301 aa3.81□□□□□ -1.8
SKP1-213ENST00000524288 CDCA4Q9BXL8 241 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms