RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 IGKV3D-15A0A087WSY6 115 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 PQLC2LA1A4F0 135 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 NKX2-6A6NCS4 301 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 TRDCB7Z8K6 153 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 MRPL33O75394 65 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 C1QL1O75973 258 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 CDS2O95674 445 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 PDGFBP01127 241 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 SERPINA7P05543 415 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 FOLR2P14207 255 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 LMO1P25800 156 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 KCNJ3P48549 501 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 RAB5CP51148 216 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 SRPXP78539 464 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 ARF1P84077 181 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 SSPNQ14714 243 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 AKIRIN2Q53H80 203 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 CDCP2Q5VXM1 449 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 SHEQ5VZ18 495 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 DPPA2Q7Z7J5 298 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 C15orf54Q8N8G6 183 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 HSD17B11Q8NBQ5 300 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 C2CD4CQ8TF44 421 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 CT55Q8WUE5 264 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 PSMF1Q92530 271 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 BOD1Q96IK1 185 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 USB1Q9BQ65 265 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 REPIN1Q9BWE0 567 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 PAPOLGQ9BWT3 736 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 FGF23Q9GZV9 251 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 C11orf1Q9H5F2 150 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 FAM86C1Q9NVL1 165 aa9.53□□□□□ -0.88
HDAC9-228ENST00000524023 STRAPQ9Y3F4 350 aaKnown RBP9.53□□□□□ -0.88
HDAC9-228ENST00000524023 COL27A1Q8IZC6 1860 aaPredicted RBP9.52□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF98A6NK75 572 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 PRH1P02810 166 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 EWSR1Q01844 656 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC9-228ENST00000524023 PRDX4Q13162 271 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 SRSF7Q16629 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC9-228ENST00000524023 C6orf15Q6UXA7 325 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-228ENST00000524023 C5orf24Q7Z6I8 188 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 TBC1D26Q86UD7 250 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 ZFP82Q8N141 532 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 SLAMF9Q96A28 289 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM56Q96MV1 263 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 CLCC1Q96S66 551 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 LINC00470Q9BZP3 86 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 EGLN1Q9GZT9 426 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 EIF5A2Q9GZV4 153 aaKnown RBP9.52□□□□□ -0.89
HDAC9-228ENST00000524023 Q9N2K0 584 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 CRIM1Q9NZV1 1036 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.89
HDAC9-228ENST00000524023 A0A096LPE4 126 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 ZNHIT1O43257 154 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 NAPSAO96009 420 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 CCNOP22674 350 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 AKR1C3P42330 323 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 HAAOP46952 286 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 RND3P61587 244 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 C9orf135Q5VTT2 229 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 SPINK14Q6IE38 97 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 OR2C3Q8N628 320 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 KDF1Q8NAX2 398 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 C14orf79Q96F83 325 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 RPS10P5Q9NQ39 176 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 COA4Q9NYJ1 87 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 BOKQ9UMX3 212 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 UBE2J1Q9Y385 318 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 WDFY4Q6ZS81 3184 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 TNRC6AQ8NDV7 1962 aaKnown RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 FAM24AA6NFZ4 105 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 TK1P04183 234 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 CCL2P13500 99 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 ASCL1P50553 236 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 GPM6AP51674 278 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 FGF12P61328 243 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 CEACAM21Q3KPI0 293 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 AWAT1Q58HT5 328 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 SPIN3Q5JUX0 258 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM182Q6ZP80 229 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF818PQ6ZRF7 136 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF695Q8IW36 515 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 SAXO1Q8IYX7 474 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
HDAC9-228ENST00000524023 SPACA1Q9HBV2 294 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 LRFN1Q9P244 771 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 LOXL2Q9Y4K0 774 aa9.51□□□□□ -0.89
HDAC9-228ENST00000524023 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 C5orf49A4QMS7 147 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 LINC01387J3KSC0 135 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 K7N7A8 449 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 HLA-HP01893 362 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 SCTP09683 121 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 LHX2P50458 406 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms