RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 FGF16O43320 207 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 CCDC22O60826 627 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 ENTPD6O75354 484 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 CYB5AP00167 134 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A15PP0C7V4 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A13PP0C7W8 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A14PP0C7W9 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FAM90A24PP0C7X0 464 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 CD34P28906 385 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FOXE3Q13461 319 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 THNSL2Q86YJ6 484 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 ENTHD1Q8IYW4 607 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 OR10X1Q8NGY0 326 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 RFESDQ8TAC1 157 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FEVQ99581 238 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 DGCR6LQ9BY27 220 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 YIPF3Q9GZM5 350 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 ALX4Q9H161 411 aaPredicted RBP9.06□□□□□ -0.96
SDCBP-211ENST00000523441 TAS2R3Q9NYW6 316 aa9.06□□□□□ -0.96
SDCBP-211ENST00000523441 FUOMA2VDF0 154 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 J3QR06 171 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 CCRL2O00421 344 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 OVOL1O14753 267 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 LDLRAD4O15165 306 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 RRP9O43818 475 aaKnown RBP9.05□□□□□ -0.96
SDCBP-211ENST00000523441 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 ERP29P30040 261 aaKnown RBP9.05□□□□□ -0.96
SDCBP-211ENST00000523441 FUT6P51993 359 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 SLURP1P55000 103 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 CXCR4P61073 352 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 GNB1P62873 340 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF616Q08AN1 781 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 MADCAM1Q13477 382 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 C17orf58Q2M2W7 97 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 ASPHD1Q5U4P2 390 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF322Q6U7Q0 402 aaPredicted RBP9.05□□□□□ -0.96
SDCBP-211ENST00000523441 ELMOD2Q8IZ81 293 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 KIRREL1Q96J84 757 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 EAF1Q96JC9 268 aaPredicted RBP9.05□□□□□ -0.96
SDCBP-211ENST00000523441 TBX5Q99593 518 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 RASL11BQ9BPW5 248 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 HSPB9Q9BQS6 159 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 TM2D3Q9BRN9 247 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 GON7Q9BXV9 100 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 PCDHB16Q9NRJ7 776 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 DNAJB9Q9UBS3 223 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 WSB1Q9Y6I7 421 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 R4GMQ9 66 aa9.05□□□□□ -0.96
SDCBP-211ENST00000523441 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
SDCBP-211ENST00000523441 TRAV39A0A0B4J263 110 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 SYT7O43581 403 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF254O75437 659 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 SRSF10O75494 262 aaKnown RBP9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ELANEP08246 267 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ATP6V1B2P21281 511 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 INSL3P51460 131 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ATP1B3P54709 279 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 MTCP1P56278 107 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 FHL3Q13643 280 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 SLC35D3Q5M8T2 416 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 OR2T5Q6IEZ7 315 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 TMEM65Q6PI78 240 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 DEGS2Q6QHC5 323 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF429Q86V71 674 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 OR5D18Q8NGL1 313 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 OR2T29Q8NH02 315 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 GIPC3Q8TF64 312 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 COQ2Q96H96 371 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 KCTD7Q96MP8 289 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ADI1Q9BV57 179 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 ABCG5Q9H222 651 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 KLK15Q9H2R5 256 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 NEK6Q9HC98 313 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 RETNQ9HD89 108 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 PSG11Q9UQ72 335 aa9.04□□□□□ -0.96
SDCBP-211ENST00000523441 MEIKINA0A087WXM9 373 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 TRBV2A0A0J9YWF9 115 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 ZNF729A6NN14 1252 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 HSD17B6O14756 317 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 GATBO75879 557 aaKnown RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 SERPINA3P01011 423 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 OCM2P0CE71 109 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 OCMP0CE72 109 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 SLC2A2P11168 524 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 HSD17B1P14061 328 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 SLC2A5P22732 501 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 MYF6P23409 242 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 RAB7AP51149 207 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 ROM1Q03395 351 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 BCDIN3DQ7Z5W3 292 aaKnown RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 TMEM179BQ7Z7N9 219 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 Q8IYB0 196 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 YIPF7Q8N8F6 280 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 Q8N9W7 124 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 OR13A1Q8NGR1 328 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms