RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DYNLT3P51808 116 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 MRPL28Q13084 256 aaKnown RBP16.65■□□□□ 0.26
SDCBP-209ENST00000522243 ATXN7L3Q14CW9 347 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-209ENST00000522243 ZSCAN26Q16670 478 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 KLHL22Q53GT1 634 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 KRBOX4Q5JUW0 171 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 ZNF691Q5VV52 312 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 ABHD12Q8N2K0 398 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 OR51A2Q8NGJ7 313 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 OR4P4Q8NGL7 312 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 COQ2Q96H96 371 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 NR1H4Q96RI1 486 aaPredicted RBP16.65■□□□□ 0.26
SDCBP-209ENST00000522243 GAL3ST2Q9H3Q3 398 aa16.65■□□□□ 0.26
SDCBP-209ENST00000522243 MRPS18AQ9NVS2 196 aaKnown RBP16.65■□□□□ 0.26
SDCBP-209ENST00000522243 ODAMA1E959 279 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 HSPB6O14558 160 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 ALX3O95076 343 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 BLCAPP62952 87 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 CDK5R1Q15078 307 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 ARSJQ5FYB0 599 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-209ENST00000522243 XAF1Q6GPH4 301 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 SATL1Q86VE3 508 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 DTX3Q8N9I9 347 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 ZNF555Q8NEP9 628 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 RGP1Q92546 391 aaPredicted RBP16.64■□□□□ 0.25
SDCBP-209ENST00000522243 CORO2AQ92828 525 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 GPER1Q99527 375 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 PRSS22Q9GZN4 317 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 PPIL3Q9H2H8 161 aaKnown RBP16.64■□□□□ 0.25
SDCBP-209ENST00000522243 RHOFQ9HBH0 211 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 TAS2R3Q9NYW6 316 aa16.64■□□□□ 0.25
SDCBP-209ENST00000522243 WBP4O75554 376 aaKnown RBP16.63■□□□□ 0.25
SDCBP-209ENST00000522243 CLIC3O95833 236 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 CD28P10747 220 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 RAB3AP20336 220 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 CD24P25063 80 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 OR52W1Q6IF63 320 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 HEPN1Q6WQI6 88 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 Q8N2B8 174 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 ZNF286AQ9HBT8 521 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 FGF20Q9NP95 211 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-209ENST00000522243 SMPD3Q9NY59 655 aaPredicted RBP16.63■□□□□ 0.25
SDCBP-209ENST00000522243 TAS2R4Q9NYW5 299 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 CMYA5Q8N3K9 4069 aa16.63■□□□□ 0.25
SDCBP-209ENST00000522243 H0YJX3 145 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 GABRPO00591 440 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 FBXO24O75426 580 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 RPSAP08865 295 aaKnown RBP16.62■□□□□ 0.25
SDCBP-209ENST00000522243 PTGFRP43088 359 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 MTNR1BP49286 362 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 ETV1P50549 477 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 NSUN5P1Q3KNT7 163 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 TMEM95Q3KNT9 176 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 UTF1Q5T230 341 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 OR2G6Q5TZ20 316 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 CHST4Q8NCG5 386 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 OR10K1Q8NGX5 313 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 CNIH3Q8TBE1 160 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 TNFAIP8L1Q8WVP5 186 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 JAM3Q9BX67 310 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 FAM192AQ9GZU8 254 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 DPM3Q9P2X0 92 aa16.62■□□□□ 0.25
SDCBP-209ENST00000522243 MAGEB3O15480 346 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 PEX14O75381 377 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 CSN2P05814 226 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 LRRC36Q1X8D7 754 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 C17orf58Q2M2W7 97 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 RTN4RL2Q86UN3 420 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 OR4D6Q8NGJ1 314 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 ZNF596Q8TC21 504 aa16.61■□□□□ 0.25
SDCBP-209ENST00000522243 ZNF729A6NN14 1252 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-209ENST00000522243 FAM90A22PA8MWA6 464 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 TOR1AO14656 332 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 NFYBP25208 207 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 BDH1Q02338 343 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 PAN3Q58A45 887 aaKnown RBP16.6■□□□□ 0.25
SDCBP-209ENST00000522243 ELP2Q6IA86 826 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 ZNF529Q6P280 563 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 RPL22L1Q6P5R6 122 aaKnown RBP16.6■□□□□ 0.25
SDCBP-209ENST00000522243 PXT1Q8NFP0 134 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 GPR148Q8TDV2 347 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 STMN2Q93045 179 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 ORAI1Q96D31 301 aa16.6■□□□□ 0.25
SDCBP-209ENST00000522243 SIRT4Q9Y6E7 314 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-209ENST00000522243 TRAV24A0A0B4J272 114 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 LEUTXA8MZ59 168 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 G3V4G9 280 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 HTR3BO95264 441 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 IGLV1-47P01700 117 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 OPN1MWP04001 364 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 OPN1MW2P0DN77 364 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 OPN1MW3P0DN78 364 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 DCKP27707 260 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 CD34P28906 385 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 GLP1RP43220 463 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 VDAC2P45880 294 aaPredicted RBP16.59■□□□□ 0.25
SDCBP-209ENST00000522243 RBM39Q14498 530 aaKnown RBP16.59■□□□□ 0.25
SDCBP-209ENST00000522243 FBLN7Q53RD9 439 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 HAVCR2Q8TDQ0 301 aa16.59■□□□□ 0.25
SDCBP-209ENST00000522243 OR6C3Q9NZP0 311 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms