RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TMEM241Q24JQ0 296 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 TMEM255AQ5JRV8 349 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 OR2A2Q6IF42 318 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 ADAD2Q8NCV1 583 aaKnown RBP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 SLX1AQ9BQ83 275 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 TMEM9BQ9NQ34 198 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 DVL1O14640 695 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 LYPD3O95274 346 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 VDAC1P21796 283 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 MPGP29372 298 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 MDH2P40926 338 aaKnown RBP12.14□□□□□ -0.47
SYNPO-205ENST00000522122 P2RY1P47900 373 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 PIPOXQ9P0Z9 390 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 CD200P41217 278 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 PPP1CBP62140 327 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 COL13A1Q5TAT6 717 aaPredicted RBP12.14□□□□□ -0.47
SYNPO-205ENST00000522122 WFDC8Q8IUA0 241 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 MPC1Q9Y5U8 109 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 SHISA7A6NL88 538 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
SYNPO-205ENST00000522122 LY86O95711 162 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 DEFB109BQ30KR1 87 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 CBLN2Q8IUK8 224 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF721Q8TF20 911 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 POM121L2Q96KW2 1035 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 CHEK1O14757 476 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 DXOO77932 396 aaKnown RBP12.14□□□□□ -0.47
SYNPO-205ENST00000522122 EIF3IQ13347 325 aaKnown RBP12.14□□□□□ -0.47
SYNPO-205ENST00000522122 GAB4Q2WGN9 574 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 MRPL24Q96A35 216 aaKnown RBP12.14□□□□□ -0.47
SYNPO-205ENST00000522122 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
SYNPO-205ENST00000522122 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 A8MXK9 166 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 CSN1S1P47710 185 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 NAAAQ02083 359 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 IGFBP7Q16270 282 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 OR6S1Q8NH40 331 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 TIMD4Q96H15 378 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 ICE1Q9Y2F5 2266 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 IGKV1D-42A0A075B6H8 117 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 TRAV17A0A0B4J275 112 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 TTRP02766 147 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
SYNPO-205ENST00000522122 FABP4P15090 132 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 RAB5AP20339 215 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 GNB1P62873 340 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 TMEM104Q8NE00 496 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
SYNPO-205ENST00000522122 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
SYNPO-205ENST00000522122 SLC2A9Q9NRM0 540 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 A0A1W2PR80 420 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 PPYP01298 95 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF766Q5HY98 468 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 DEFB123Q8N688 67 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 M1APQ8TC57 530 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
SYNPO-205ENST00000522122 FCGR3BO75015 233 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 YIF1AO95070 293 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 CST2P09228 141 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 MEOX1P50221 254 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 ROM1Q03395 351 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 COL19A1Q14993 1142 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 ERVFC1-1P60608 527 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 TFF2Q03403 129 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 PLAC9Q5JTB6 97 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 CHST5Q9GZS9 411 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 HEXA-AS1Q9H8Q6 139 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 SPRY3O43610 288 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 OR2I1PQ8NGU4 316 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 FGF11Q92914 225 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 TANC1Q9C0D5 1861 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 SYNGR2O43760 224 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF737O75373 536 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 CD8AP01732 235 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 PNLIPP16233 465 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 TMEM11P17152 192 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 OR2M3Q8NG83 312 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 AQP3Q92482 292 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
SYNPO-205ENST00000522122 AMDHD2Q9Y303 409 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms