RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 METRNQ9UJH8 293 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 PKDREJQ9NTG1 2253 aa17.89■□□□□ 0.46
R3HCC1-208ENST00000522012 LINC00854A0A1B0GVQ3 168 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 CA11O75493 328 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 RP2O75695 350 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 GLAP06280 429 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 SSTR2P30874 369 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 GDNFP39905 211 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 EFNA4P52798 201 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF57Q68EA5 555 aaPredicted RBP17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 STUMQ69YW2 141 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 ANGPTL6Q8NI99 470 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 IGFBPL1Q8WX77 278 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 TRIM63Q969Q1 353 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 MARVELD3Q96A59 401 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 HDHD3Q9BSH5 251 aaPredicted RBP17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 PPA2Q9H2U2 334 aa17.89■□□□□ 0.45
R3HCC1-208ENST00000522012 LMO1P25800 156 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 HIST2H2BCQ6DN03 193 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 LURAP1LQ8IV03 231 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 LYSMD2Q8IV50 215 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 ASCC1Q8N9N2 400 aaKnown RBP17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 NRGNQ92686 78 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 CHST6Q9GZX3 395 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 SEBOXQ9HB31 216 aaPredicted RBP17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 IFT46Q9NQC8 304 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 ING3Q9NXR8 418 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 ETAA1Q9NY74 926 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 MTFP1Q9UDX5 166 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF222Q9UK12 451 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 PSPNO60542 156 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 CARTPTQ16568 116 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF787Q6DD87 383 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 PEG10Q86TG7 708 aaKnown RBP17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 CCL13Q99616 98 aa17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 CHMP1AQ9HD42 196 aaPredicted RBP17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 RBMX2Q9Y388 322 aaKnown RBP17.88■□□□□ 0.45
R3HCC1-208ENST00000522012 TMEM82A0PJX8 343 aa17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 BTG1P62324 171 aa17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 ZMYND11Q15326 602 aa17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 TOMM5Q8N4H5 51 aa17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 GVQW1Q8N7I0 195 aa17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 ST6GALNAC5Q9BVH7 336 aa17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 SPTAN1Q13813 2472 aaKnown RBP17.87■□□□□ 0.45
R3HCC1-208ENST00000522012 RAI1Q7Z5J4 1906 aaPredicted RBP17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 CACNA1DQ01668 2161 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ARFGEF3Q5TH69 2177 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 GSTT2BP0CG30 244 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 AMY2BP19961 511 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 CBX5P45973 191 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ACTBP60709 375 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ACTG1P63261 375 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ATXN7L3Q14CW9 347 aaPredicted RBP17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 C17orf107Q6ZR85 190 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 OR4S1Q8NGB4 309 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 OCSTAMPQ9BR26 566 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF665Q9H7R5 613 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 CHODLQ9H9P2 273 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 TMEM165Q9HC07 324 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 MYOZ1Q9NP98 299 aaPredicted RBP17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 C12orf4Q9NQ89 552 aa17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF701Q9NV72 531 aaPredicted RBP17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF230Q9UIE0 474 aaPredicted RBP17.86■□□□□ 0.45
R3HCC1-208ENST00000522012 CHD3Q12873 2000 aaKnown RBP17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 NKX6-3A6NJ46 265 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 PPIHO43447 177 aaKnown RBP17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 OR3A1P47881 315 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 KCNJ8Q15842 424 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 AVPI1Q5T686 147 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF561Q8N587 486 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNRF1Q8ND25 227 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 PLPPR1Q8TBJ4 325 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 SETD6Q8TBK2 473 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 SDSLQ96GA7 329 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 TIMD4Q96H15 378 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 GAFA1Q96PS6 74 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 MAB21L2Q9Y586 359 aa17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 HRNRQ86YZ3 2850 aaPredicted RBP17.85■□□□□ 0.45
R3HCC1-208ENST00000522012 USP9YO00507 2555 aaPredicted RBP17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 ISPDA4D126 451 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF737O75373 536 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 RCVRNP35243 200 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 MDH2P40926 338 aaKnown RBP17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 SSBP1Q04837 148 aaKnown RBP17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 GRK1Q15835 563 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 ATPAF1Q5TC12 328 aaPredicted RBP17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 ZNF788Q6ZQV5 615 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 PPP1R35Q8TAP8 253 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 MAFIPQ8WZ33 124 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 RAB1CQ92928 201 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 SNX22Q96L94 193 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 TMEM246Q9BRR3 403 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 SHARPINQ9H0F6 387 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 TAS2R8Q9NYW2 309 aa17.84■□□□□ 0.45
R3HCC1-208ENST00000522012 A0A1B0GW55 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 ANKRD20A5PA0PJZ0 165 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 TMPRSS2O15393 492 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 ECDO95905 644 aaPredicted RBP17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 IGHV4-39P01824 125 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 FCGR3AP08637 254 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms