RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LINC00336Q6ZUF6 198 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 RRM2BQ7LG56 351 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 TRPM8Q7Z2W7 1104 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 ZNF575Q86XF7 245 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 LILRB2Q8N423 598 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 RNF148Q8N7C7 305 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 OR2T4Q8NH00 348 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 FANK1Q8TC84 345 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 TSPEARQ8WU66 669 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 LEAP2Q969E1 77 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 NMNAT2Q9BZQ4 307 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 PLEKHA3Q9HB20 300 aa6.7□□□□□ -1.34
TRAPPC9-212ENST00000521944 A0A0J9YWU9 116 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 ZNF736B4DX44 427 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 J3QR06 171 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 RRP9O43818 475 aaKnown RBP6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 SOX15O60248 233 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 RGS11O94810 467 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 IGLV3-1P01715 115 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 APOC1P02654 83 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 CGB3P0DN86 165 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 CGB7P0DN87 165 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 FASP25445 335 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 DUSP1P28562 367 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 FMO3P31513 532 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 GLIPR1P48060 266 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 PITPNAQ00169 270 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 PLCXD3Q63HM9 321 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 TMEM42Q69YG0 159 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 TRAPPC6BQ86SZ2 158 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 ZNF573Q86YE8 665 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 ANKRD13BQ86YJ7 626 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 PGAM4Q8N0Y7 254 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 ANKRD42Q8N9B4 389 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 SLC37A3Q8NCC5 494 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 OR9G1Q8NH87 305 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 CASTOR1Q8WTX7 329 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 S1PR3Q99500 378 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 CCDC28BQ9BUN5 200 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 WFDC10AQ9H1F0 79 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 SEBOXQ9HB31 216 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 PCDHB16Q9NRJ7 776 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 STUB1Q9UNE7 303 aa6.69□□□□□ -1.34
TRAPPC9-212ENST00000521944 FAM183AA6NL82 134 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 RTL8CO15255 209 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 HAND1O96004 215 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 NRASP01111 189 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 H1F0P07305 194 aaKnown RBP6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 GABRR1P24046 479 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 PEX2P28328 305 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 KLF10Q13118 480 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 OR8H3Q8N146 312 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 DEFB125Q8N687 156 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 MINDY2Q8NBR6 621 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 TMEM104Q8NE00 496 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 LRGUKQ96M69 825 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 GAL3ST2Q9H3Q3 398 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 TAS2R3Q9NYW6 316 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 NDUFAF4Q9P032 175 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 PSG11Q9UQ72 335 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 POLDIP2Q9Y2S7 368 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 KLK5Q9Y337 293 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 FBXO7Q9Y3I1 522 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 ENPP4Q9Y6X5 453 aa6.68□□□□□ -1.34
TRAPPC9-212ENST00000521944 IGKV1-27A0A075B6S5 117 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 IGHV1-3A0A0C4DH29 117 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 MGST3O14880 152 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 ANGPT2O15123 496 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 MPZL2O60487 215 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 INMTO95050 263 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 LGALS1P09382 135 aaKnown RBP6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 SPI1P17947 270 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 SOX6P35712 828 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 REG1BP48304 166 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 RAB7AP51149 207 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 MECP2P51608 486 aaKnown RBP6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 ZNF91Q05481 1191 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 AESQ08117 197 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 RIPPLY1Q0D2K3 151 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 IL24Q13007 206 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 MADCAM1Q13477 382 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 GALEQ14376 348 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 KPNB1Q14974 876 aaKnown RBP6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 IFI44LQ53G44 452 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 C19orf54Q5BKX5 351 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 ERICH5Q6P6B1 374 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 ASRGL1Q7L266 308 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 IZUMO1Q8IYV9 350 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 FAM86B1Q8N7N1 296 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 OR8J3Q8NGG0 315 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 OR52J3Q8NH60 311 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 FAM81AQ8TBF8 368 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 SLAMF9Q96A28 289 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 COQ2Q96H96 371 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 C20orf173Q96LM9 149 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 TEAD3Q99594 435 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 CHCHD6Q9BRQ6 235 aa6.67□□□□□ -1.34
TRAPPC9-212ENST00000521944 PKIBQ9C010 78 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms