RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CDC14BO60729 498 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 RPLP1P05386 114 aaKnown RBP14.26□□□□□ -0.13
USP42-207ENST00000521713 CNN1P51911 297 aaKnown RBP14.26□□□□□ -0.13
USP42-207ENST00000521713 RAB32Q13637 225 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 MESTQ5EB52 335 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 DMRTC1Q5HYR2 192 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 GPR35Q9HC97 309 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 hADV38S2A0JD32 116 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 OR11H7Q8NGC8 314 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 C10orf35Q96D05 121 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 ANAPC16Q96DE5 110 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 CHRNA10Q9GZZ6 450 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 RBFOX3A6NFN3 312 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 AGFG2O95081 481 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 BGLAPP02818 100 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 HIST1H1DP16402 221 aaKnown RBP14.26□□□□□ -0.13
USP42-207ENST00000521713 ZNF273Q14593 569 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 CBLN2Q8IUK8 224 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 ABHD3Q8WU67 409 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 ZNRF4Q8WWF5 429 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 ANGPTL4Q9BY76 406 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 GAL3ST2Q9H3Q3 398 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 FBXL17Q9UF56 701 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 DTX4Q9Y2E6 619 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 TUBGCP6Q96RT7 1819 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 TEX50A0A1B0GTY4 177 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 VMA21Q3ZAQ7 101 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 MAGT1Q9H0U3 335 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 FZR1Q9UM11 496 aa14.26□□□□□ -0.13
USP42-207ENST00000521713 TMEM272A0A1B0GTI8 110 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 IAPPP10997 89 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 RPL13AP40429 203 aaKnown RBP14.25□□□□□ -0.13
USP42-207ENST00000521713 SULT1A2P50226 295 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 ERVFC1-1P60608 527 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 RASL12Q9NYN1 266 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 C7orf77A4D0Y5 90 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 CRHP06850 196 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 FCER1GP30273 86 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 RPL11P62913 178 aaKnown RBP14.25□□□□□ -0.13
USP42-207ENST00000521713 MS4A5Q9H3V2 200 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 NAT8Q9UHE5 227 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 TRAV38-1A0A0B4J264 116 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 MPZL1O95297 269 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 CXCL3P19876 107 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 HNF1AP20823 631 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 ZBTB25P24278 435 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 PARP11Q9NR21 331 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 HS3ST3B1Q9Y662 390 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 A0A1B0GTH9 108 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 NUBP1P53384 320 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 PLPPR5Q32ZL2 321 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 DMKNQ6E0U4 476 aaPredicted RBP14.25□□□□□ -0.13
USP42-207ENST00000521713 OR4D11Q8NGI4 311 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 PLXNA1Q9UIW2 1896 aa14.25□□□□□ -0.13
USP42-207ENST00000521713 LNP1A1A4G5 178 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 FFAR1O14842 300 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 OR7C2O60412 319 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 PDCD6O75340 191 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 PMCHP20382 165 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 MOB3BQ86TA1 216 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 CRIPAKQ8N1N5 446 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 UCN2Q96RP3 112 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 ONECUT1Q9UBC0 465 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 LOC285556D6RIA3 1793 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 AHRRA9YTQ3 701 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 CCL2P13500 99 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 OR10J1P30954 320 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 NCMAPQ5T1S8 102 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 C1orf185Q5T7R7 199 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 LYRM7Q5U5X0 104 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 CHAC2Q8WUX2 184 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 MAP1LC3B2A6NCE7 125 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 H3BMH7 237 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 SOX15O60248 233 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 ZNF79Q15937 498 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 OR2C3Q8N628 320 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 ZNF441Q8N8Z8 693 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 MAP1LC3BQ9GZQ8 125 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 GVINP1Q7Z2Y8 2422 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 ZFP36L2P47974 494 aaKnown RBP14.24□□□□□ -0.13
USP42-207ENST00000521713 IGFBP7Q16270 282 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 TMEM251Q8N6I4 163 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 TET1Q8NFU7 2136 aa14.24□□□□□ -0.13
USP42-207ENST00000521713 DBX1A6NMT0 343 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 IGHA1P01876 353 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 SEMG1P04279 462 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 SULT1A1P50225 295 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 RAB7AP51149 207 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 NAAAQ02083 359 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 CLEC12BQ2HXU8 276 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 ZNF383Q8NA42 475 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 ERGIC1Q969X5 290 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 GPR37O15354 613 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 TSPAN2O60636 221 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 CST7O76096 145 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 ACP1P24666 158 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 P2RY1P47900 373 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 FAM74A3Q4VXF1 159 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 C1orf174Q8IYL3 243 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms