RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CCNOP22674 350 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 ARL2P36404 184 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 TAS2R31P59538 309 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 FKBP1AP62942 108 aaKnown RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 ELF3P78545 371 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 KDSRQ06136 332 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 KRTAP13-3Q3SY46 172 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LINC00483Q53H64 154 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SMUG1Q53HV7 270 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SNX20Q7Z614 316 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC13A5Q86YT5 568 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC30A8Q8IWU4 369 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 ENTHD1Q8IYW4 607 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LRRC34Q8IZ02 419 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LGI3Q8N145 548 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CA13Q8N1Q1 262 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 RIBC1Q8N443 379 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 DRAXINQ8NBI3 349 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 S100PBPQ96BU1 408 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SELENOSQ9BQE4 189 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LXNQ9BS40 222 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SFXN3Q9BWM7 321 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 COA1Q9GZY4 146 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LRRC19Q9H756 370 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 PSTPIP2Q9H939 334 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 PARVGQ9HBI0 331 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CA10Q9NS85 328 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 MRM2Q9UI43 246 aaKnown RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 DNAJC12Q9UKB3 198 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 UTP11Q9Y3A2 253 aaKnown RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 PPIL1Q9Y3C6 166 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 VWA8A3KMH1 1905 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 PLXNB3Q9ULL4 1909 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CASP8AP2Q9UKL3 1982 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 A0A1W2PP18 115 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 J3QT63 122 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 M0R1B8 84 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 UPK1AO00322 258 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SPAG7O75391 227 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF324O75467 553 aaPredicted RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 UPK1BO75841 260 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 LYPLA2O95372 231 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 CCNE2O96020 404 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 NQO1P15559 274 aaKnown RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 PRKACBP22694 351 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 COILP38432 576 aaPredicted RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 OPRK1P41145 380 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC18A1P54219 525 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 PLTPP55058 493 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SNRPFP62306 86 aaKnown RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 MOBPQ13875 183 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 EBI3Q14213 229 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SHHQ15465 462 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SNRNP35Q16560 246 aaKnown RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC25A35Q3KQZ1 300 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 FBXL19-AS1Q494R0 122 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 FAM78AQ5JUQ0 283 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 OPN5Q6U736 354 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 Q6ZT83 130 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRMT10CQ7L0Y3 403 aaKnown RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF720Q7Z2F6 126 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 CALHM1Q8IU99 346 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 UBALD2Q8IYN6 164 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC7A5P1Q8MH63 180 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 UBL4BQ8N7F7 174 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 NECAP1Q8NC96 275 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR1L1Q8NH94 360 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF461Q8TAF7 563 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 LRRC20Q8TCA0 184 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZFAND1Q8TCF1 268 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 C10orf82Q8WW14 230 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SNF8Q96H20 258 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 GLT1D1Q96MS3 346 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF75AQ96N20 296 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SPACA5Q96QH8 159 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 RNF5Q99942 180 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF649Q9BS31 505 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 EMC6Q9BV81 110 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 FRMD8P1Q9BZ68 369 aaPredicted RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ULBP2Q9BZM5 246 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 PORCNQ9H237 461 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR52A5Q9H2C5 316 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 CENPHQ9H3R5 247 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMEM100Q9NV29 134 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 FGFR1OP2Q9NVK5 253 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF223Q9UK11 482 aaPredicted RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 KLK12Q9UKR0 248 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 RPL26L1Q9UNX3 145 aaKnown RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 SNX24Q9Y343 169 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 COQ4Q9Y3A0 265 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 WIF1Q9Y5W5 379 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMEM14AQ9Y6G1 99 aa2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 NUP210Q8TEM1 1887 aaPredicted RBP2.02□□□□□ -2.09
HMGN1P28-201ENST00000521340 MICAL3Q7RTP6 2002 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 CLUHO75153 1309 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 IGKV1-6A0A0C4DH72 117 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC5A10A0PJK1 596 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 SMIM23A6NLE4 172 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 HSBP1L1C9JCN9 74 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 F8VP50 259 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms