RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ZNF83P51522 516 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 CEBPGP53567 150 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 RBM39Q14498 530 aaKnown RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 CLINT1Q14677 625 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 FIP1L1Q6UN15 594 aaKnown RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 ZNF826PQ6ZT77 177 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 LGI3Q8N145 548 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 TECTBQ96PL2 329 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 NUDT16L1Q9BRJ7 211 aaKnown RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 DNTTIP1Q9H147 329 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 OPN3Q9H1Y3 402 aaPredicted RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 TMEM231Q9H6L2 316 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 ZNF71Q9NQZ8 489 aaPredicted RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 RNF150Q9ULK6 438 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 PPP1R3CQ9UQK1 317 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 PPYP01298 95 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 RPL12P30050 165 aaKnown RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 FOXC1Q12948 553 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 EDDM3AQ14507 147 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 HNF4GQ14541 408 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 HSD17B11Q8NBQ5 300 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 OR5A2Q8NGI9 324 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 OR10J5Q8NHC4 309 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 ERRFI1Q9UJM3 462 aaPredicted RBP9.76□□□□□ -0.85
CLK4-206ENST00000520878 ZNF175Q9Y473 711 aa9.76□□□□□ -0.85
CLK4-206ENST00000520878 GTF3C1Q12789 2109 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 LINC00862A6NCI5 91 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 ZNF891A8MT65 544 aaPredicted RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 CTSDP07339 412 aaPredicted RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 ATF4P18848 351 aaPredicted RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 GABRA2P47869 451 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 EIF5AL1Q6IS14 154 aaKnown RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 BAP18Q8IXM2 172 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 TMEM217Q8N7C4 229 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 MED19A0JLT2 244 aaPredicted RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 MSGN1A6NI15 193 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 CD37P11049 281 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 WNT5AP41221 380 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 EIF5AP63241 154 aaKnown RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 OR2B11Q5JQS5 317 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 NHLRC3Q5JS37 347 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 HPSE2Q8WWQ2 592 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 NAA60Q9H7X0 242 aa9.75□□□□□ -0.85
CLK4-206ENST00000520878 INTS1Q8N201 2190 aaKnown RBP9.75□□□□□ -0.85
CLK4-206ENST00000520878 ABCA4P78363 2273 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 KIR2DS1A0A191URI9 304 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 RPS10-NUDT3A0A1W2PQS6 291 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 M0R1B8 84 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 TUSC2O75896 110 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 IL2RAP01589 272 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 IGLV3-1P01715 115 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 OR8U9P0C7N5 309 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 PVALBP20472 110 aaPredicted RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 DTYMKP23919 212 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 HOXD11P31277 338 aaPredicted RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 ECI1P42126 302 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 KIR2DS4P43632 304 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 CEBPDP49716 269 aaPredicted RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 KIR2DS1Q14954 304 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 ZNF610Q8N9Z0 462 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 SUMF2Q8NBJ7 301 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 OR8U1Q8NH10 309 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 KIRREL1Q96J84 757 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 LINC00052Q96N35 136 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 NARFLQ9H6Q4 476 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 CCL28Q9NRJ3 127 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 EXPH5Q8NEV8 1989 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 FRYQ5TBA9 3013 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 MED6O75586 246 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 IGHV1-2P23083 117 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 CD82P27701 267 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 IL2RGP31785 369 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 ALDH3B1P43353 468 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 FOXF2Q12947 444 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 BCL2L2Q92843 193 aaPredicted RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 NINJ1Q92982 152 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 KCNIP1Q9NZI2 227 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 DNAJB11Q9UBS4 358 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 HSF4Q9ULV5 492 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 MPC1Q9Y5U8 109 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 PLCE1Q9P212 2302 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 BMP5P22003 454 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 FGF12P61328 243 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 RPL7L1Q6DKI1 246 aaKnown RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 RFESDQ8TAC1 157 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 SPACA1Q9HBV2 294 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 MYOZ1Q9NP98 299 aaPredicted RBP9.74□□□□□ -0.85
CLK4-206ENST00000520878 TMEM100Q9NV29 134 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 KIF25Q9UIL4 384 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 ADAMTS20P59510 1910 aa9.74□□□□□ -0.85
CLK4-206ENST00000520878 OR2A2Q6IF42 318 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 PRSS54Q6PEW0 395 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 ZGRF1Q86YA3 2104 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 GAPTQ8N292 157 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 C9orf106Q8NAJ2 232 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 MUCL1Q96DR8 90 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 TSNAXQ99598 290 aaKnown RBP9.73□□□□□ -0.85
CLK4-206ENST00000520878 TAF9BQ9HBM6 251 aa9.73□□□□□ -0.85
CLK4-206ENST00000520878 SPTBN1Q01082 2364 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms