RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 H3F3CQ6NXT2 135 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MED27Q6P2C8 311 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 C22orf39Q6P5X5 142 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRIM40Q6P9F5 258 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SMARCD3Q6STE5 483 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SPNS3Q6ZMD2 512 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RFLNAQ6ZTI6 216 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 HSD11B1LQ7Z5J1 315 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MRPL52Q86TS9 123 aaKnown RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 PARGQ86W56 976 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 GPR137CQ8N3F9 429 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 HDDC3Q8N4P3 179 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 EID2Q8N6I1 236 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CCDC54Q8NEL0 328 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR5M1Q8NGP8 315 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR9A1PQ8NGU1 263 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR5J2Q8NH18 312 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR4K15Q8NH41 348 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 NEIL3Q8TAT5 605 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPS4Y2Q8TD47 263 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RNASEH2CQ8TDP1 164 aaKnown RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 C16orf78Q8WTQ4 265 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TCTEX1D2Q8WW35 142 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 GEMIN6Q8WXD5 167 aaKnown RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR5P2Q8WZ92 322 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MRPS31Q92665 395 aaKnown RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM203Q969S6 136 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC25A36Q96CQ1 311 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 NEURL3Q96EH8 262 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 C14orf79Q96F83 325 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SAMD8Q96LT4 415 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR5B2Q96R09 309 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CLCC1Q96S66 551 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ARL6Q9H0F7 186 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 PCBD2Q9H0N5 130 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM231Q9H6L2 316 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 NMNAT1Q9HAN9 279 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SGK2Q9HBY8 427 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM138Q9NPI0 162 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CYTL1Q9NRR1 136 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TAS2R3Q9NYW6 316 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 AHSPQ9NZD4 102 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 DNAJC27Q9NZQ0 273 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CACFD1Q9UGQ2 172 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 IL20RAQ9UHF4 553 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TNFSF18Q9UNG2 199 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC35A3Q9Y2D2 325 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 PLEKHA6Q9Y2H5 1048 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 HDGFL3Q9Y3E1 203 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MMACHCQ9Y4U1 282 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MTCH2Q9Y6C9 303 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ENPP4Q9Y6X5 453 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 KIAA2026Q5HYC2 2103 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CHD3Q12873 2000 aaKnown RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 DOCK3Q8IZD9 2030 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ADAMTS9Q9P2N4 1935 aa2.4□□□□□ -2.02
HMGB1P41-201ENST00000520234 DOCK8Q8NF50 2099 aa2.4□□□□□ -2.02
HMGB1P41-201ENST00000520234 PLXNA2O75051 1894 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A1B0GW55 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 IRGMA1A4Y4 181 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM183AA6NL82 134 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM210A6NLX4 147 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPR89AB7ZAQ6 455 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 E7EQ34 232 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAAHO00519 579 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 MFNGO00587 321 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARPC5O15511 151 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DLEU1O43261 78 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SSNA1O43805 119 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2F2O95006 317 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 LRATO95237 230 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 NSA2O95478 260 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC2A10O95528 541 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ETHE1O95571 254 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CPSF4O95639 269 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 LY6G6DO95868 133 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 IFNW1P05000 195 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GUSBP08236 651 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GIG44P09565 113 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD3GP09693 182 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4E1P0C645 316 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GKN3PP0CG01 181 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPR89BP0CG08 455 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4L2P0CJ85 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4L3P0CJ86 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4L4P0CJ87 422 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4L5P0CJ88 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4L6P0CJ89 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4L7P0CJ90 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC35E2P0CK97 266 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ERGP11308 486 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 NQO2P16083 231 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ATF1P18846 271 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GSTM3P21266 225 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DRD5P21918 477 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GABRR2P28476 465 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD1CP29017 333 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 PBLDP30039 288 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 AKT2P31751 481 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD200P41217 278 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms