RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RAB7AP51149 207 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 PRRX1P54821 245 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 CDK6Q00534 326 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 KRR1Q13601 381 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 OR52W1Q6IF63 320 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 REEP3Q6NUK4 255 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 LCA5Q86VQ0 697 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 UBE2DNLQ8IWF7 75 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 TMEM61Q8N0U2 210 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 Q8NAQ8 132 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 OR9G1Q8NH87 305 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 ZNF671Q8TAW3 534 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 DEFB104AQ8WTQ1 72 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 SPTSSAQ969W0 71 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 SNX22Q96L94 193 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 ZNF570Q96NI8 536 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 MBOAT4Q96T53 435 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 KRTAP1-5Q9BYS1 174 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 OPA3Q9H6K4 179 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 MAP6D1Q9H9H5 199 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 NMNAT1Q9HAN9 279 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 SLC25A37Q9NYZ2 338 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 GRHPRQ9UBQ7 328 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 PSG11Q9UQ72 335 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 FOXA2Q9Y261 457 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 NUBP2Q9Y5Y2 271 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 U3KQV3 271 aa4.82□□□□□ -1.64
CTNNA1-216ENST00000519489 C5orf58C9J3I9 102 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 HSD17B6O14756 317 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 NXPH2O95156 264 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 MOSP00540 346 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CGB3P0DN86 165 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CGB7P0DN87 165 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 IFI30P13284 250 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 NCK1P16333 377 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 TNFRSF1BP20333 461 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 RBM34P42696 430 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 OR3A1P47881 315 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 P2RX3P56373 397 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 TPPP2P59282 170 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 GNG3P63215 75 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 ZNF816Q0VGE8 651 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 MADCAM1Q13477 382 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 GRK1Q15835 563 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 C12orf74Q32Q52 190 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 SLC16A13Q7RTY0 426 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 TRAPPC6BQ86SZ2 158 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 SLC35F6Q8N357 371 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CSNK2A3Q8NEV1 391 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CACNG8Q8WXS5 425 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CORO2AQ92828 525 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 BPIFA2Q96DR5 249 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 NDUFAF3Q9BU61 184 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 ADGRL4Q9HBW9 690 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 ZDHHC18Q9NUE0 388 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 THUMPD1Q9NXG2 353 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 CNOT2Q9NZN8 540 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 KLHDC2Q9Y2U9 406 aa4.81□□□□□ -1.64
CTNNA1-216ENST00000519489 DEFB131BA0A096LNP1 70 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 A0A0B4J203 849 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 TMEM247A6NEH6 219 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 PRORSD1PA6NEY8 169 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 FAM220BPB1ANY3 271 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 CLIC1O00299 241 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 SOCS2O14508 198 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 XKRYO14609 159 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 IFNA21P01568 189 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 IFNA17P01571 189 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 NFYBP25208 207 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 SLC7A2P52569 658 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 FXYD6P3P58550 94 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 MAD2L1Q13257 205 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 PIN1Q13526 163 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 FAM57BQ71RH2 274 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 KRT74Q7RTS7 529 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 NR2C2APQ86WQ0 139 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 NUDT10Q8NFP7 164 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 OR52B4Q8NGK2 314 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 KCNJ15Q99712 375 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 ANKRD60Q9BZ19 345 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 ZNF355PQ9NSJ1 428 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 THAP1Q9NVV9 213 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 UBQLN2Q9UHD9 624 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 RIMS3Q9UJD0 308 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 GAB2Q9UQC2 676 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 A3GALT2U3KPV4 340 aa4.8□□□□□ -1.64
CTNNA1-216ENST00000519489 M0QX08 132 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 OR2A4O95047 310 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 IFNA14P01570 189 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 HLA-DRB1P01911 266 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 FOLR2P14207 255 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 DUSP1P28562 367 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 CD1BP29016 333 aa4.79□□□□□ -1.64
CTNNA1-216ENST00000519489 GNG10P50151 68 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms