RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ZDHHC11BP0C7U3 371 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 CRABP2P29373 138 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 S100GP29377 79 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 P2RY4P51582 365 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 RIPPLY3P57055 190 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 TCTAP57738 103 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 HIST1H3AP68431 136 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 CXCL6P80162 114 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 SLC7A9P82251 487 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 HPCAP84074 193 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 H3F3AP84243 136 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 RUNX1Q01196 453 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 EGFEM1PQ0D2K5 195 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 PNOCQ13519 176 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 CCDC58Q4VC31 144 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 N4BP2L1Q5TBK1 243 aaPredicted RBP2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 ZNF343Q6P1L6 599 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 OPN5Q6U736 354 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 PAMR1Q6UXH9 720 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 C9orf47Q6ZRZ4 202 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 HIST2H3AQ71DI3 136 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 NEGR1Q7Z3B1 354 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 SMIM29Q86T20 159 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 Q8N1X5 172 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 ZNF614Q8N883 585 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR4M1Q8NGD0 313 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR10G9Q8NGN4 311 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR9I1Q8NGQ6 314 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR10A6Q8NH74 314 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 DCAKDQ8WVC6 231 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 CCL17Q92583 94 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 TM4SF18Q96CE8 201 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 FXYD5Q96DB9 178 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 SMARCD1Q96GM5 515 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 DIRAS2Q96HU8 199 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 F2RL3Q96RI0 385 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 TBX5Q99593 518 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 MIXL1Q9H2W2 232 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 MARCH5Q9NX47 278 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 IDI2-AS1Q9NZ38 188 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 ENOPH1Q9UHY7 261 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 ZNF223Q9UK11 482 aaPredicted RBP2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 HDGFL3Q9Y3E1 203 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 NPHP4O75161 1426 aaPredicted RBP2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 MIA3Q5JRA6 1907 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 ARHGEF10O15013 1369 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 NAV1Q8NEY1 1877 aa2.99□□□□□ -1.93
RNU4-60P-201ENST00000517239 A0A087WWV3 80 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 IGHV3-35A0A0C4DH35 117 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 PQLC2LA1A4F0 135 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR4C46A6NHA9 309 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 EEF1E1-BLOC1S5C9J1V9 151 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 PEX7O00628 323 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 EEF1E1O43324 174 aaKnown RBP2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR2A4O95047 310 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 EPPINO95925 133 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 CA2P00918 260 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 HBZP02008 142 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 SCGB1A1P11684 91 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 CYBAP13498 195 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 IDO1P14902 403 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 ZNF30P17039 623 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 PSMB1P20618 241 aaKnown RBP2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 HIST1H1TP22492 207 aaPredicted RBP2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 MAP2K4P45985 399 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR1E2P47887 323 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 GABRA4P48169 554 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 GZMMP51124 257 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 SLC25A1P53007 311 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 SLC18A1P54219 525 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 GFERP55789 205 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 SYNJ2BPP57105 145 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 HERVK_113P61574 105 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 RPL23P62829 140 aaKnown RBP2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 IFITM3Q01628 133 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 PRDX4Q13162 271 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 APOFQ13790 326 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 NSDHLQ15738 373 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 SNRNP35Q16560 246 aaKnown RBP2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 ACOT6Q3I5F7 207 aaPredicted RBP2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 Q499Y3 187 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 ZFP69Q49AA0 526 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 ATP6AP1LQ52LC2 224 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 TCEAL5Q5H9L2 206 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 BRMS1LQ5PSV4 323 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 CYB5R2Q6BCY4 276 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 Q6ZSR6 202 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 NATD1Q8N6N6 113 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR4X1Q8NH49 305 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 MCFD2Q8NI22 146 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 GRPEL2Q8TAA5 225 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 LZICQ8WZA0 190 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 TCEAL3Q969E4 200 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 NEURL3Q96EH8 262 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 LINC00477Q96M19 166 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 RNF157Q96PX1 679 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 OR2A7Q96R45 310 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 TSC22D3Q99576 134 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 CGREF1Q99674 301 aa2.98□□□□□ -1.93
RNU4-60P-201ENST00000517239 GINS3Q9BRX5 216 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms