RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	SDCBP	O00560	298 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CDIPT	O14735	213 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TIMM8A	O60220	97 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	PTBP3	O95758	552 aa	Known RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	THBD	P07204	575 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	GIP	P09681	153 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	OR5H8	P0DN80	308 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SFTPC	P11686	197 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CD40	P25942	277 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CD200	P41217	278 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ECI1	P42126	302 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CA7	P43166	264 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	NPY4R	P50391	375 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TAS2R31	P59538	309 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ARPC4	P59998	168 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RAP2B	P61225	183 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TSPAN5	P62079	268 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RPS23	P62266	143 aa	Known RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	IFITM2	Q01629	132 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SRSF4	Q08170	494 aa	Known RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	MZT1	Q08AG7	82 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DHRS2	Q13268	280 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	IKZF1	Q13422	519 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	PPP1R1A	Q13522	171 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RBM39	Q14498	530 aa	Known RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ZNF146	Q15072	292 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	MPPED2	Q15777	294 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	C2orf68	Q2NKX9	166 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	C4orf46	Q504U0	113 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SPIN3	Q5JUX0	258 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SHE	Q5VZ18	495 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	LAMTOR1	Q6IAA8	161 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ZNF880	Q6PDB4	577 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	UNQ6494/PRO21346	Q6UXR6	183 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	C17orf107	Q6ZR85	190 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TMED4	Q7Z7H5	227 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	LYG2	Q86SG7	212 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	LRP11	Q86VZ4	500 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	GAPT	Q8N292	157 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	C12orf45	Q8N5I9	185 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SUMF2	Q8NBJ7	301 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ADAD2	Q8NCV1	583 aa	Known RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ST6GALNAC3	Q8NDV1	305 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	NUP37	Q8NFH4	326 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ZFAND1	Q8TCF1	268 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	MITD1	Q8WV92	249 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TMEM171	Q8WVE6	324 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ASB13	Q8WXK3	278 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DYRK2	Q92630	601 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RND1	Q92730	232 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TMEM230	Q96A57	120 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	HYLS1	Q96M11	299 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RIMS4	Q9H426	269 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	C5orf66	Q9H5L9	145 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ZNF286A	Q9HBT8	521 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854		Q9N2K0	584 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CA10	Q9NS85	328 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ZNF701	Q9NV72	531 aa	Predicted RBP	3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	NECAP2	Q9NVZ3	263 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TREM2	Q9NZC2	230 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	EHF	Q9NZC4	300 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SHPK	Q9UHJ6	478 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SH3BGRL2	Q9UJC5	107 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	FZR1	Q9UM11	496 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	MEMO1	Q9Y316	297 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CACNA1G	O43497	2377 aa		3.8	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ELOA3C	A0A087WX78	387 aa	Predicted RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TRGV8	A0A0C4DH27	118 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DPRX	A6NFQ7	191 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DBX1	A6NMT0	343 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	TRDC	B7Z8K6	153 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ATP6V1G2-DDX39B	F2Z307	99 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854		F5H5P2	479 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SLC33A1	O00400	549 aa	Predicted RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	GOSR2	O14653	212 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SH2D1B	O14796	132 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DEGS1	O15121	323 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SLC22A5	O76082	557 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	NXPH2	O95156	264 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	SFT2D2	O95562	160 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DUS4L	O95620	317 aa	Known RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	OR2H2	O95918	312 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	HLA-A	P01891	365 aa	Known RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CTSD	P07339	412 aa	Predicted RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	GRP	P07492	148 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	GSTT2	P0CG29	244 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	ZNF44	P15621	663 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	RPS2	P15880	293 aa	Known RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	PPP3CB	P16298	524 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	AKR1C4	P17516	323 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DNASE1	P24855	282 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	PTAFR	P25105	342 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	LMO1	P25800	156 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	DUSP1	P28562	367 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CD34	P28906	385 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CFHR2	P36980	270 aa		3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	MDH2	P40926	338 aa	Known RBP	3.79	□□□□□ -1.8
ATP2C1-223	ENST00000515854	CASP6	P55212	293 aa		3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms