RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 CHST6Q9GZX3 395 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 NCOR1P1Q9H4R4 102 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 DUSP21Q9H596 190 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 PCDHB16Q9NRJ7 776 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 LSM2Q9Y333 95 aaKnown RBP10.42□□□□□ -0.74
CLCN3-210ENST00000515420 UBE2J1Q9Y385 318 aaPredicted RBP10.42□□□□□ -0.74
CLCN3-210ENST00000515420 MMP24Q9Y5R2 645 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 TENM1Q9UKZ4 2725 aa10.42□□□□□ -0.74
CLCN3-210ENST00000515420 A0A0G2JK05 382 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 FAM181BA6NEQ2 426 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 SLC33A1O00400 549 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-210ENST00000515420 NDUFA7O95182 113 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 IGHV4-59P01825 116 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 CRYBA1P05813 215 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 CALCBP10092 127 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 TGFBR2P37173 567 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 KCNJ3P48549 501 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 DOC2BQ14184 412 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 IRF3Q14653 427 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 SPHARQ15513 63 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 KIAA2026Q5HYC2 2103 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 GDPGP1Q6ZNW5 385 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 C3orf56Q8N813 242 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 NKAIN3Q8N8D7 197 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 OR11H6Q8NGC7 330 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 CORO2AQ92828 525 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 S100A13Q99584 98 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 ZNF184Q99676 751 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-210ENST00000515420 FAM192AQ9GZU8 254 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 METTL9Q9H1A3 318 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 GAL3ST2Q9H3Q3 398 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 TAS2R3Q9NYW6 316 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 VPREB3Q9UKI3 123 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 RAB26Q9ULW5 256 aa10.41□□□□□ -0.74
CLCN3-210ENST00000515420 TBL2Q9Y4P3 447 aaKnown RBP10.41□□□□□ -0.74
CLCN3-210ENST00000515420 TRAV8-7A0A075B6U6 113 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 TRGV10A0A0A0MS01 117 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 PNMA8CA0A1B0GUJ8 204 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 POM121CA8CG34 1229 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 ODF3BA8MYP8 253 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 DEGS1O15121 323 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 RGS10O43665 173 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 CLPXO76031 633 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 ATP6V1G2O95670 118 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 CSTBP04080 98 aaKnown RBP10.4□□□□□ -0.74
CLCN3-210ENST00000515420 CRHBPP24387 322 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 OR3A4PP47883 348 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 LGALS4P56470 323 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 PRB3Q04118 309 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-210ENST00000515420 GPR176Q14439 515 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 ZNF626Q68DY1 528 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 ZNF782Q6ZMW2 699 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-210ENST00000515420 PNKDQ8N490 385 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 TPRX1Q8N7U7 411 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 FOXRED1Q96CU9 486 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-210ENST00000515420 ORAI1Q96D31 301 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 AJUBAQ96IF1 538 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 PPA2Q9H2U2 334 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 ISYNA1Q9NPH2 558 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 BLOC1S6Q9UL45 172 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 SESN1Q9Y6P5 492 aa10.4□□□□□ -0.74
CLCN3-210ENST00000515420 A0A1W2PRD5 423 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 A0A1W2PRF3 423 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 A0A1W2PRM7 423 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 ODAMA1E959 279 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 MEGF11A6BM72 1044 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 FAM90A8PA6NJQ4 464 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 GPR137BO60478 399 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 VHLP40337 213 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 RBM11P57052 281 aaKnown RBP10.39□□□□□ -0.75
CLCN3-210ENST00000515420 TAF9Q16594 264 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 KRBOX4Q5JUW0 171 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 RBM48Q5RL73 367 aaKnown RBP10.39□□□□□ -0.75
CLCN3-210ENST00000515420 OR52W1Q6IF63 320 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 UNQ9370/PRO34162Q6UXP9 181 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 HEPN1Q6WQI6 88 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 PRSS48Q7RTY5 328 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 TRAPPC6BQ86SZ2 158 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 OSR2Q8N2R0 312 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 OR4F5Q8NH21 305 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 MRPS24Q96EL2 167 aaKnown RBP10.39□□□□□ -0.75
CLCN3-210ENST00000515420 COQ2Q96H96 371 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 OR5M11Q96RB7 305 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 OR6C3Q9NZP0 311 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 C1RLQ9NZP8 487 aa10.39□□□□□ -0.75
CLCN3-210ENST00000515420 TRAV24A0A0B4J272 114 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 MAGEA13PA6NCF6 341 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 ZNF729A6NN14 1252 aaPredicted RBP10.38□□□□□ -0.75
CLCN3-210ENST00000515420 VGLL3A8MV65 326 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 PIN1P1O15428 100 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 SC5DO75845 299 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 CDRT1O95170 752 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 HTR3BO95264 441 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 GTF2F2P13984 249 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 COX7A1P24310 79 aa10.38□□□□□ -0.75
CLCN3-210ENST00000515420 GLIPR1P48060 266 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms