RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 KIAA0141Q14154 515 aaPredicted RBP12.65□□□□□ -0.38
TRIO-222ENST00000515144 ZNF665Q9H7R5 613 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 NEU3Q9UQ49 428 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 RPL12P30050 165 aaKnown RBP12.65□□□□□ -0.38
TRIO-222ENST00000515144 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 MRGPRGQ86SM5 289 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 SYS1Q8N2H4 156 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 DNASE2BQ8WZ79 361 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 NACAE9PAV3 2078 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 RPUSD3Q6P087 351 aaKnown RBP12.65□□□□□ -0.38
TRIO-222ENST00000515144 ASCL5Q7RTU5 278 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
TRIO-222ENST00000515144 CEBPDP49716 269 aaPredicted RBP12.65□□□□□ -0.39
TRIO-222ENST00000515144 FAHD1Q6P587 224 aa12.65□□□□□ -0.39
TRIO-222ENST00000515144 FUCA1P04066 466 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 ZNF17P17021 662 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 CCL13Q99616 98 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 C1QCP02747 245 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 RAB7AP51149 207 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 SLC25A30Q5SVS4 291 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 RABAC1Q9UI14 185 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 ARRDC5A6NEK1 342 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 SMPD2O60906 423 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 SEMA7AO75326 666 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 C11orf42Q8N5U0 333 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 DOCK11Q5JSL3 2073 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 CEP192Q8TEP8 1941 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 SERPINE3A8MV23 424 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 GFRA1P56159 465 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 TRAPPC4Q9Y296 219 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 AQP8O94778 261 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
TRIO-222ENST00000515144 LTBRP36941 435 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 ABHD17AQ96GS6 310 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 CIB3Q96Q77 187 aaPredicted RBP12.64□□□□□ -0.39
TRIO-222ENST00000515144 TMEM38BQ9NVV0 291 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 RIF1Q5UIP0 2472 aaKnown RBP12.64□□□□□ -0.39
TRIO-222ENST00000515144 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
TRIO-222ENST00000515144 RNF224P0DH78 156 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 ERVFC1-1P60608 527 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 CDK5Q00535 292 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 DHODHQ02127 395 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.63□□□□□ -0.39
TRIO-222ENST00000515144 ZNF787Q6DD87 383 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 MED30Q96HR3 178 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 OOEPA6NGQ2 149 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 E5RGE8 158 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 TXNDC12O95881 172 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 RPL31P62899 125 aaKnown RBP12.63□□□□□ -0.39
TRIO-222ENST00000515144 ATG4DQ86TL0 474 aaPredicted RBP12.63□□□□□ -0.39
TRIO-222ENST00000515144 SVBPQ8N300 66 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
TRIO-222ENST00000515144 NSG2Q9Y328 171 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 A0A0J9YW62 118 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 FGF20Q9NP95 211 aaPredicted RBP12.63□□□□□ -0.39
TRIO-222ENST00000515144 SLC35D1Q9NTN3 355 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 NCOR1O75376 2440 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 NHLRC1Q6VVB1 395 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 LHX4Q969G2 390 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 GOLT1BQ9Y3E0 138 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 KCNAB3O43448 404 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 CEACAM1P13688 526 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 PSMB6P28072 239 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 PPP1R1CQ8WVI7 109 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 SLC17A2O00624 439 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 CTSSP25774 331 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 TPPP2P59282 170 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 ZNF528Q3MIS6 628 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 ZMIZ1Q9ULJ6 1067 aa12.63□□□□□ -0.39
TRIO-222ENST00000515144 FGF2P09038 288 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 CMPK2Q5EBM0 449 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 RXFP4Q8TDU9 374 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 WDR34Q96EX3 536 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 B3GALNT1O75752 331 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 FGF5P12034 268 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 DHRS7BQ6IAN0 325 aaPredicted RBP12.62□□□□□ -0.39
TRIO-222ENST00000515144 FKBP11Q9NYL4 201 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 OR2C1O95371 312 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 CACNG5Q9UF02 275 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
TRIO-222ENST00000515144 SNRPCP09234 159 aaKnown RBP12.62□□□□□ -0.39
TRIO-222ENST00000515144 THYN1Q9P016 225 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 CST2P09228 141 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 ACSM4P0C7M7 580 aa12.62□□□□□ -0.39
TRIO-222ENST00000515144 HIST1H1DP16402 221 aaKnown RBP12.62□□□□□ -0.39
TRIO-222ENST00000515144 MRPS11P82912 194 aaKnown RBP12.62□□□□□ -0.39
TRIO-222ENST00000515144 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 OR5B21A6NL26 309 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms