RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MARCH11A6NNE9 402 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF732B4DXR9 585 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 NPIPA2E9PIF3 369 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SCGNO76038 276 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 AMY2AP04746 511 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SERPINA5P05154 406 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 GLP1RP43220 463 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 RBP2P50120 134 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 DSCR4P56555 118 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SLC35A1P78382 337 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 GXYLT1Q4G148 440 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 Q5PR19 223 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 H1FNTQ75WM6 255 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ADPRHL1Q8NDY3 354 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM234Q8WY98 164 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 FGGYQ96C11 551 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SEC22AQ96IW7 307 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 NICN1Q9BSH3 213 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SYT4Q9H2B2 425 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 TXNIPQ9H3M7 391 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 RCL1Q9Y2P8 373 aaKnown RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 RNF115Q9Y4L5 304 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 MEIS3P1A6NDR6 274 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 MT-ATP6P00846 226 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 CRABP1P29762 137 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 GABRA3P34903 492 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SELENOVP59797 346 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SSX2Q16385 188 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 MEP1BQ16820 701 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM211Q6ICI0 200 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 PCSK4Q6UW60 755 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 LINC00696Q6ZRV3 163 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 MDGA2Q7Z553 956 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF101Q8IZC7 436 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SELENOHQ8IZQ5 122 aaKnown RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 FADS6Q8N9I5 356 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ST8SIA1Q92185 356 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SARAFQ96BY9 339 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 LYZL4Q96KX0 146 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF471Q9BX82 626 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ZDHHC11Q9H8X9 412 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 NIT2Q9NQR4 276 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF319Q9P2F9 582 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 MEGF11A6BM72 1044 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 DNPH1O43598 174 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 CDC14BO60729 498 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 RAMP1O60894 148 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 HIST1H1DP16402 221 aaKnown RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 CXCR1P25024 350 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 MEOX1P50221 254 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 GAGE1Q13065 139 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 BEX5Q5H9J7 111 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 DPY19L4Q7Z388 723 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 OR52N4Q8NGI2 321 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 OR10J5Q8NHC4 309 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 CD300LFQ8TDQ1 290 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 DOK4Q8TEW6 326 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 C14orf79Q96F83 325 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF479Q96JC4 524 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 AKR1E2Q96JD6 320 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 TBL1XR1Q9BZK7 514 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 OPN3Q9H1Y3 402 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 SIRT7Q9NRC8 400 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ANKUB1A6NFN9 424 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 H0YL77 283 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 PITX3O75364 302 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 CRYGCP07315 174 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 GZMBP10144 247 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 ESDP10768 282 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 GLIPR1P48060 266 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 RAB5CP51148 216 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 CDK20Q8IZL9 346 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 TNFAIP8L1Q8WVP5 186 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 DDIT4LQ96D03 193 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 CMBLQ96DG6 245 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 SIGLEC12Q96PQ1 595 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 TAF9BQ9HBM6 251 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 LOC102725191A0A1B0GVB3 256 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 K7EPK0 472 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 WDR1O75083 606 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 UTS2O95399 124 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 SCGB1D1O95968 90 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 NDUFB7P17568 137 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 PRKXP51817 358 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 UCP3P55916 312 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 RPL27P61353 136 aaKnown RBP6.37□□□□□ -1.39
CLIP1-205ENST00000514271 VAMP2P63027 116 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 IL13RA1P78552 427 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 PLGLB1Q02325 96 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
CLIP1-205ENST00000514271 ALG10Q5BKT4 473 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 TRAPPC6BQ86SZ2 158 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 FAM71E2Q8N5Q1 922 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM104Q8NE00 496 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 CCDC54Q8NEL0 328 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 MARCH1Q8TCQ1 289 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 GRHL3Q8TE85 626 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 ABHD14BQ96IU4 210 aa6.37□□□□□ -1.39
CLIP1-205ENST00000514271 PDCD10Q9BUL8 212 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms