RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 FAM90A22PA8MWA6 464 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 SIRPB1O00241 398 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 F2RL2O00254 374 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 SULT1B1O43704 296 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 ZFPL1O95159 310 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 BAG2O95816 211 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 OR2H2O95918 312 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 IGHA1P01876 353 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 CSN2P05814 226 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 CD2P06729 351 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 HCKP08631 526 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 VSIG10L2P0DP72 767 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 ZNF44P15621 663 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 RAB3AP20336 220 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 CDK2P24941 298 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 DCKP27707 260 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 C21orf33P30042 268 aaPredicted RBP5.89□□□□□ -1.47
HTT-212ENST00000513639 OR3A1P47881 315 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 MTNR1BP49286 362 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 AESQ08117 197 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 MED21Q13503 144 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 ELP2Q6IA86 826 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 CCDC144NLQ6NUI1 221 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 RPL22L1Q6P5R6 122 aaKnown RBP5.89□□□□□ -1.47
HTT-212ENST00000513639 C16orf82Q7Z2V1 217 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 KLHDC1Q8N7A1 406 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 PXT1Q8NFP0 134 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 OR13C9Q8NGT0 318 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 GPR148Q8TDV2 347 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 GPER1Q99527 375 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 SLC29A1Q99808 456 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 ISG20L2Q9H9L3 353 aaKnown RBP5.89□□□□□ -1.47
HTT-212ENST00000513639 AMBNQ9NP70 447 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 PAK1IP1Q9NWT1 392 aaPredicted RBP5.89□□□□□ -1.47
HTT-212ENST00000513639 CHCHD3Q9NX63 227 aaKnown RBP5.89□□□□□ -1.47
HTT-212ENST00000513639 BABAM2Q9NXR7 383 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 MYRFQ9Y2G1 1151 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 SIGLEC9Q9Y336 463 aa5.89□□□□□ -1.47
HTT-212ENST00000513639 IGKV1-12A0A0C4DH73 117 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 KBTBD11-OT1A0A1B0GTJ5 212 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 ODAMA1E959 279 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 MEX3AA1L020 520 aaKnown RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 ZNF729A6NN14 1252 aaPredicted RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 OOSP1A8MZH6 123 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 M0QZK8 103 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 XPNPEP2O43895 674 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 IGKV1D-12P01611 117 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OPN1MWP04001 364 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 RPLP1P05386 114 aaKnown RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 FAM106CPP0CH98 169 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OPN1MW2P0DN77 364 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OPN1MW3P0DN78 364 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 CALCBP10092 127 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 GZMHP20718 246 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 PAX6P26367 422 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 CD34P28906 385 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 MNDAP41218 407 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 PTGFRP43088 359 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 GLIPR1P48060 266 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 KCNJ3P48549 501 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 SNU13P55769 128 aaKnown RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 RSU1Q15404 277 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 PLA1AQ53H76 456 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 KRBOX4Q5JUW0 171 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 ZNF691Q5VV52 312 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 TTC23Q5W5X9 447 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 Q6P435 159 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 CCBE1Q6UXH8 406 aaPredicted RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 SLC16A12Q6ZSM3 486 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 CENPVQ7Z7K6 275 aaPredicted RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 SATL1Q86VE3 508 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 DYNAPQ8N1N2 210 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 PQLC1Q8N2U9 271 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 TPRX1Q8N7U7 411 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OR4F17Q8NGA8 305 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OR51A4Q8NGJ6 313 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OR52I1Q8NGK6 324 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 TSEN15Q8WW01 171 aaKnown RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 RFT1Q96AA3 541 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 SPACA5Q96QH8 159 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 OR4F4Q96R69 305 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 S100A13Q99584 98 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 JAM3Q9BX67 310 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 FGF20Q9NP95 211 aaPredicted RBP5.88□□□□□ -1.47
HTT-212ENST00000513639 C8orf4Q9NR00 106 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 IL36RNQ9UBH0 155 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 AASSQ9UDR5 926 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 FOXJ3Q9UPW0 622 aa5.88□□□□□ -1.47
HTT-212ENST00000513639 A0A087X0M5 115 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 A0A1B0GX30 115 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 BUB1B-PAK6H3BSN5 160 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 SLC33A1O00400 549 aaPredicted RBP5.87□□□□□ -1.47
HTT-212ENST00000513639 CHST1O43916 411 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 ZNF780AO75290 641 aaPredicted RBP5.87□□□□□ -1.47
HTT-212ENST00000513639 FBXO24O75426 580 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 IGLV1-47P01700 117 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 MYL12AP19105 171 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 VDAC2P45880 294 aaPredicted RBP5.87□□□□□ -1.47
HTT-212ENST00000513639 BLCAPP62952 87 aa5.87□□□□□ -1.47
HTT-212ENST00000513639 PPP3R1P63098 170 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms