RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RTN4RL2Q86UN3 420 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 SPICQ8N5J4 248 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 DTX3Q8N9I9 347 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 ZNRF1Q8ND25 227 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 ARHGAP5-AS1Q96IT6 56 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 SNX22Q96L94 193 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 SOSTQ9BQB4 213 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 DPCDQ9BVM2 203 aaPredicted RBP10.44□□□□□ -0.74
PDPN-210ENST00000513143 PECRQ9BY49 303 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 FAM234AQ9H0X4 552 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.44□□□□□ -0.74
PDPN-210ENST00000513143 PLEKHJ1Q9NW61 149 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 KCNK7Q9Y2U2 307 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 DSCAML1Q8TD84 2053 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 TRAV18A0A075B6X5 111 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 IGHV4-30-2A0A087WSY4 118 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 A0A1B0GW55 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 MCRIP1C9JLW8 97 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 K7N7A8 449 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 MFNGO00587 321 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 TMPRSS2O15393 492 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 ADAM20O43506 726 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 HLA-DQB1P01920 261 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 TK1P04183 234 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 GSTP1P09211 210 aaKnown RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 WNT2P09544 360 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L2P0CJ85 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L3P0CJ86 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L4P0CJ87 422 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L5P0CJ88 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L6P0CJ89 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L7P0CJ90 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 SELLP14151 372 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 GNB3P16520 340 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 ETV6P41212 452 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 OR3A1P47881 315 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 TAS2R20P59543 309 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 RBM39Q14498 530 aaKnown RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 ARL6IP1Q15041 203 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 CDNFQ49AH0 187 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 PAN3Q58A45 887 aaKnown RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 NKAPLQ5M9Q1 402 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 SHEQ5VZ18 495 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 BRICD5Q6PL45 260 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 KRTAP1-3Q8IUG1 177 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 IZUMO1Q8IYV9 350 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 FAM216BQ8N7L0 139 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 ASCC1Q8N9N2 400 aaKnown RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 OR4S1Q8NGB4 309 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 ST8SIA4Q92187 359 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 CYYR1Q96J86 154 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 FOXC2Q99958 501 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 SULT4A1Q9BR01 284 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 FAAP24Q9BTP7 215 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 SHARPINQ9H0F6 387 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 PATZ1Q9HBE1 687 aaKnown RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 RABL2AQ9UBK7 228 aaPredicted RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 CTSZQ9UBR2 303 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 DUX4Q9UBX2 424 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 MIOXQ9UGB7 285 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 RABL2BQ9UNT1 228 aa10.43□□□□□ -0.74
PDPN-210ENST00000513143 PRRC2AP48634 2157 aaKnown RBP10.43□□□□□ -0.74
PDPN-210ENST00000513143 FABP12A6NFH5 140 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 F5H0A9 414 aaPredicted RBP10.42□□□□□ -0.74
PDPN-210ENST00000513143 HSPB6O14558 160 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 FCN3O75636 299 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 CSN2P05814 226 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 MELTFP08582 738 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 SLC25A16P16260 332 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 KCNJ3P48549 501 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 SPANXN2Q5MJ10 180 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 Q5PR19 223 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 BAIAP2L2Q6UXY1 529 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 ZNF841Q6ZN19 808 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 OR8H2Q8N162 312 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 BPIFB2Q8N4F0 458 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 OR5D13Q8NGL4 314 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 PPP1R35Q8TAP8 253 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
PDPN-210ENST00000513143 CHST6Q9GZX3 395 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 PPA2Q9H2U2 334 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 AUNIPQ9H7T9 357 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 ZMAT3Q9HA38 289 aaKnown RBP10.42□□□□□ -0.74
PDPN-210ENST00000513143 PCDHB10Q9UN67 800 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 V9GYH0 126 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 MALRD1Q5VYJ5 2156 aa10.42□□□□□ -0.74
PDPN-210ENST00000513143 UBE2QL1A1L167 161 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 SERPINE3A8MV23 424 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 DVL1O14640 695 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 MGST3O14880 152 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 NDUFB3O43676 98 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 CA11O75493 328 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 RPS2P15880 293 aaKnown RBP10.41□□□□□ -0.74
PDPN-210ENST00000513143 PTBP1P26599 531 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDPN-210ENST00000513143 PAX5Q02548 391 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 LSAMPQ13449 338 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 GRK1Q15835 563 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 PNLIPRP3Q17RR3 467 aa10.41□□□□□ -0.74
PDPN-210ENST00000513143 LRRC10Q5BKY1 277 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms