RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 NICN1Q9BSH3 213 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF717Q9BY31 904 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 HAUS4Q9H6D7 363 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 LYRM4Q9HD34 91 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 TREX1Q9NSU2 369 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 MED11Q9P086 117 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 COPS3Q9UNS2 423 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 CFL2Q9Y281 166 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 STK38LQ9Y2H1 464 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 N6AMT1Q9Y5N5 214 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 CACNG2Q9Y698 323 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 DSPPQ9NZW4 1301 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 IGHV3-15A0A0B4J1V0 119 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 IGHV2OR16-5A0A0B4J2B6 119 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 FAM231BA6NCW3 169 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 C17orf51A8MQB3 221 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SUPT3HB4E1H0 165 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SEC14L6B5MCN3 397 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 H3BUX3 64 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 K7N7A8 449 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 RS1O15537 224 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SYNGR1O43759 233 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 EEDO75530 441 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 GNA14O95837 355 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 CCDC172P0C7W6 258 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF14P17017 642 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MSR1P21757 451 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MSNP26038 577 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 IMPA1P29218 277 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 IL12BP29460 328 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 AQP1P29972 269 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SLC6A1P30531 599 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 NTSP30990 170 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 EVI2BP34910 448 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 NUP62P37198 522 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MYCNOSP40205 109 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MAP3K8P41279 467 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 VDAC2P45880 294 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 CLDN8P56748 225 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 RAB25P57735 213 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MRPS22P82650 360 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 IL5RAQ01344 420 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 STX5Q13190 355 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 PLPPR5Q32ZL2 321 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ALKBH6Q3KRA9 238 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 HIKESHIQ53FT3 197 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SOHLH1Q5JUK2 328 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 PDZK1Q5T2W1 519 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 OTPQ5XKR4 325 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SSX9Q7RTT3 188 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 KRTAP11-1Q8IUC1 163 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF645Q8N7E2 425 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MNS1Q8NEH6 495 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 OR2L5Q8NG80 312 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 OR7G1Q8NGA0 311 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 OR1L4Q8NGR5 311 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 CLHC1Q8NHS4 586 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 DOK4Q8TEW6 326 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 RNF138Q8WVD3 245 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ST8SIA1Q92185 356 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SGK3Q96BR1 496 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 C10orf35Q96D05 121 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MS4A6EQ96DS6 147 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 PRRC1Q96M27 445 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 RNF145Q96MT1 663 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF317Q96PQ6 595 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ALS2CR12Q96Q35 445 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SIKE1Q9BRV8 207 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ROGDIQ9GZN7 287 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 GEMIN7Q9H840 131 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 ISG20L2Q9H9L3 353 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 NOX3Q9HBY0 568 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 LZTFL1Q9NQ48 299 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 POLE4Q9NR33 117 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 PARVAQ9NVD7 372 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 NLE1Q9NVX2 485 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 MRPL22Q9NWU5 206 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 SIGLEC8Q9NYZ4 499 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 WARS2Q9UGM6 360 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 PHF11Q9UIL8 331 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 POLDIP2Q9Y2S7 368 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 NOSIPQ9Y314 301 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 PLLPQ9Y342 182 aa2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 AK6Q9Y3D8 172 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 HEATR1Q9H583 2144 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-208ENST00000511439 TRAV25A0A0B4J276 109 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 OR51F1A6NGY5 319 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF879B4DU55 563 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 H0Y9J4 135 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 GOLGA8TH3BQL2 631 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 KIF2AO00139 706 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 PRMT5O14744 637 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 RAD51CO43502 376 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 PRKYO43930 277 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 MRPL33O75394 65 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 LGI1O95970 557 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CST1P01037 141 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 ETS2P15036 469 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CPN2P22792 545 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms