RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 LGALS12Q96DT0 336 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
TPM3-219ENST00000509409 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 GMPPBQ9Y5P6 360 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 ODAMA1E959 279 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 LMO1P25800 156 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 CEACAM3P40198 252 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 PTGFRP43088 359 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 ALDH3A2P51648 485 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 GALEQ14376 348 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
TPM3-219ENST00000509409 KPRPQ5T749 579 aaPredicted RBP12.33□□□□□ -0.44
TPM3-219ENST00000509409 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 REC114Q7Z4M0 266 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 SERPINA12Q8IW75 414 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 SAXO1Q8IYX7 474 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 CREB3L1Q96BA8 519 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 ALG8Q9BVK2 526 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 COMMD4Q9H0A8 199 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 RHOFQ9HBH0 211 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 MYRFQ9Y2G1 1151 aa12.33□□□□□ -0.44
TPM3-219ENST00000509409 TCRBV4S1A1TA0A5B7 111 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 RPSAP08865 295 aaKnown RBP12.32□□□□□ -0.44
TPM3-219ENST00000509409 DBTP11182 482 aaKnown RBP12.32□□□□□ -0.44
TPM3-219ENST00000509409 CD33P20138 364 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 NFYBP25208 207 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 GDNFP39905 211 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 OR3A4PP47883 348 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
TPM3-219ENST00000509409 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 C9orf152Q5JTZ5 239 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 Q6P435 159 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 SATL1Q86VE3 508 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 CBR4Q8N4T8 237 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 CHST4Q8NCG5 386 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 WIPF2Q8TF74 440 aaPredicted RBP12.32□□□□□ -0.44
TPM3-219ENST00000509409 Q96MT0 163 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 SLC25A33Q9BSK2 321 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 ISG20L2Q9H9L3 353 aaKnown RBP12.32□□□□□ -0.44
TPM3-219ENST00000509409 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 DHDHQ9UQ10 334 aa12.32□□□□□ -0.44
TPM3-219ENST00000509409 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 SLC33A1O00400 549 aaPredicted RBP12.31□□□□□ -0.44
TPM3-219ENST00000509409 HSPB6O14558 160 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 PIN1P1O15428 100 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 MAGEB3O15480 346 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 FADS2O95864 444 aaKnown RBP12.31□□□□□ -0.44
TPM3-219ENST00000509409 LPLP06858 475 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 PF4V1P10720 104 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 MNDAP41218 407 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 GBX2P52951 348 aaPredicted RBP12.31□□□□□ -0.44
TPM3-219ENST00000509409 KISS1Q15726 138 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 TPTE2P1Q5T6R2 138 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 ZFP1Q6P2D0 407 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 TSEN15Q8WW01 171 aaKnown RBP12.31□□□□□ -0.44
TPM3-219ENST00000509409 GPER1Q99527 375 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 AMBNQ9NP70 447 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 NECAP2Q9NVZ3 263 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 OR6C3Q9NZP0 311 aa12.31□□□□□ -0.44
TPM3-219ENST00000509409 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.31□□□□□ -0.44
TPM3-219ENST00000509409 TMEM212A6NML5 194 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 ZNF729A6NN14 1252 aaPredicted RBP12.3□□□□□ -0.44
TPM3-219ENST00000509409 H0YJX3 145 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 BUB1B-PAK6H3BSN5 160 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 SULT1B1O43704 296 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 OR2F2O95006 317 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 IGLV1-47P01700 117 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 CCDC159P0C7I6 412 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 MTNR1BP49286 362 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 CD83Q01151 205 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 HLA-DRB5Q30154 266 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 ZNF691Q5VV52 312 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 LPCAT4Q643R3 524 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 CCDC144NLQ6NUI1 221 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 Q6ZPA2 131 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 CCDC121Q6ZUS5 278 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 COQ2Q96H96 371 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
TPM3-219ENST00000509409 PDCD1LG2Q9BQ51 273 aa12.3□□□□□ -0.44
TPM3-219ENST00000509409 PPIL3Q9H2H8 161 aaKnown RBP12.3□□□□□ -0.44
TPM3-219ENST00000509409 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 KBTBD11-OT1A0A1B0GTJ5 212 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 SH2D7A6NKC9 451 aaPredicted RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 E9PI62 339 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 H3BNX3 289 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 MPZL2O60487 215 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 ALX3O95076 343 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 ZFPL1O95159 310 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 PF4P02776 101 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 CSN2P05814 226 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 FAM106CPP0CH98 169 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 RAB3AP20336 220 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 CD34P28906 385 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms