RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 OR5B21A6NL26 309 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 GFRA3O60609 400 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 CA11O75493 328 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 RP2O75695 350 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 COQ8AQ8NI60 647 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 SECTM1Q8WVN6 248 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 UBQLN2Q9UHD9 624 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 TRAV24A0A0B4J272 114 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
PHF3-209ENST00000509330 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
PHF3-209ENST00000509330 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
PHF3-209ENST00000509330 MLNRO43193 412 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 NXPH2O95156 264 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 DHODHQ02127 395 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 SPIN3Q5JUX0 258 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
PHF3-209ENST00000509330 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 GLP1RP43220 463 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 C22orf34Q6ZV56 151 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 DCUN1D4Q92564 292 aa12.66□□□□□ -0.38
PHF3-209ENST00000509330 IGHV2OR16-5A0A0B4J2B6 119 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 hCG_1807616A0A1W2PRN6 198 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 OR5H1A6NKK0 313 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 DBX1A6NMT0 343 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 DEGS1O15121 323 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 TNFSF12O43508 249 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 IFNA2P01563 188 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 IFNA7P01567 189 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 HERV-K104P61576 105 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 TMEM200AQ86VY9 491 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 THAP6Q8TBB0 222 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 RTN4IP1Q8WWV3 396 aaPredicted RBP12.65□□□□□ -0.38
PHF3-209ENST00000509330 VRK1Q99986 396 aaPredicted RBP12.65□□□□□ -0.38
PHF3-209ENST00000509330 ITGB1BP2Q9UKP3 347 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 MAB21L2Q9Y586 359 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 CEACAM18A8MTB9 384 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 J3QT63 122 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 S100A1P23297 94 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 NHLH1Q02575 133 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 HERPUD1Q15011 391 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 ELP2Q6IA86 826 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 MEX3BQ6ZN04 569 aaKnown RBP12.65□□□□□ -0.38
PHF3-209ENST00000509330 GALNT11Q8NCW6 608 aa12.65□□□□□ -0.38
PHF3-209ENST00000509330 CACNA1DQ01668 2161 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 HMSDA8MTL9 139 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 CD8AP01732 235 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 CRYABP02511 175 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 RAC2P15153 192 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 IL24Q13007 206 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 MSMPQ1L6U9 139 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 TMEM211Q6ICI0 200 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 UNQ6126/PRO20091Q6UXV3 157 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 BOLLQ8N9W6 283 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 RELL2Q8NC24 303 aaPredicted RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 SLC2A9Q9NRM0 540 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 TMEM100Q9NV29 134 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 PURGQ9UJV8 347 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 CRHP06850 196 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 Q6ZR03 302 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 BEND4Q6ZU67 534 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 MRPL24Q96A35 216 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 ESRP2Q9H6T0 727 aaKnown RBP12.64□□□□□ -0.39
PHF3-209ENST00000509330 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
PHF3-209ENST00000509330 H0YIZ8 118 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 HSD17B6O14756 317 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 OR2H2O95918 312 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 PPYP01298 95 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 CTSDP07339 412 aaPredicted RBP12.63□□□□□ -0.39
PHF3-209ENST00000509330 GCH1P30793 250 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 LUMP51884 338 aaPredicted RBP12.63□□□□□ -0.39
PHF3-209ENST00000509330 RAB32Q13637 225 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 Q9N2K0 584 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 SLC34A2O95436 690 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 RLN2P04090 185 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 PSMB6P28072 239 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 FGL1Q08830 312 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 Q8NFD4 153 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 SYT3Q9BQG1 590 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
PHF3-209ENST00000509330 IGKV1D-13A0A0B4J2D9 117 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 LRP5LA4QPB2 252 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 PHF1O43189 567 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms