RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 RCVRNP35243 200 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 AP3S2P59780 193 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 IL13RA1P78552 427 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 PAX5Q02548 391 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 COL10A1Q03692 680 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 MADCAM1Q13477 382 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 DCTN2Q13561 401 aaKnown RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 PDCD1Q15116 288 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 TMEM155Q4W5P6 130 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 ATPAF1Q5TC12 328 aaPredicted RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 SFRP4Q6FHJ7 346 aaPredicted RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 ZNF788Q6ZQV5 615 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 DCDC5Q6ZRR9 648 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 DNM1P46Q6ZS02 220 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 OR8H2Q8N162 312 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 SPICQ8N5J4 248 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 ASCC1Q8N9N2 400 aaKnown RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 OR5D13Q8NGL4 314 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 GPX8Q8TED1 209 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 ZFAND2BQ8WV99 257 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 DEDD2Q8WXF8 326 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 MED30Q96HR3 178 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 SNX22Q96L94 193 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 CMSS1Q9BQ75 279 aaKnown RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 SULT4A1Q9BR01 284 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 GSX2Q9BZM3 304 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 FAM234AQ9H0X4 552 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 ZMAT3Q9HA38 289 aaKnown RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 C12orf4Q9NQ89 552 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 IFT46Q9NQC8 304 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 ETAA1Q9NY74 926 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 MTFP1Q9UDX5 166 aa8.69□□□□□ -1.02
RFC1-211ENST00000509084 ZNF107Q9UII5 783 aaPredicted RBP8.69□□□□□ -1.02
RFC1-211ENST00000509084 GCN1Q92616 2671 aaKnown RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 TRAV24A0A0B4J272 114 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 NDUFS8O00217 210 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 MGST3O14880 152 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 PPIHO43447 177 aaKnown RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 UPK1BO75841 260 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 ECDO95905 644 aaPredicted RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 IGHV2-70P01814 119 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 IL7P13232 177 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 DNASE1P24855 282 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 GPR6P46095 362 aaPredicted RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 PDLIM4P50479 330 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 DSCR9P59020 149 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 DGCR2P98153 550 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 SRSF7Q16629 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
RFC1-211ENST00000509084 FAM201AQ5SY85 155 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 C16orf87Q6PH81 154 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 MOB1BQ7L9L4 216 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 TRAPPC6BQ86SZ2 158 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 TGIF2LYQ8IUE0 185 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 CD177Q8N6Q3 437 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 C19orf18Q8NEA5 215 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 OR5T2Q8NGG2 359 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 OR52I2Q8NH67 350 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 NUDCD2Q8WVJ2 157 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 TRIM63Q969Q1 353 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 SEH1LQ96EE3 360 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 SDHCQ99643 169 aaPredicted RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 THAP7Q9BT49 309 aaPredicted RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 FAAP24Q9BTP7 215 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 PPA2Q9H2U2 334 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 BEX4Q9NWD9 120 aaPredicted RBP8.68□□□□□ -1.02
RFC1-211ENST00000509084 DCAF16Q9NXF7 216 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 KAAG1Q9UBP8 84 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 AK3Q9UIJ7 227 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 MGAT4AQ9UM21 535 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 KCNK7Q9Y2U2 307 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 CACNA1DQ01668 2161 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 ABCA4P78363 2273 aa8.68□□□□□ -1.02
RFC1-211ENST00000509084 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 TMEM30CPA0ZSE6 113 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 UBE2QL1A1L167 161 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 ISPDA4D126 451 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 LYNX1G3V0Z9 82 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 K7N7A8 449 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 HSPB6O14558 160 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 TMPRSS2O15393 492 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 ZNF737O75373 536 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 IGHV4-39P01824 125 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 GYPAP02724 150 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 CSF1P09603 554 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 LYNX1P0DP58 116 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 GIFP27352 417 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 FAUP35544 74 aaKnown RBP8.67□□□□□ -1.02
RFC1-211ENST00000509084 GDNFP39905 211 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 OR3A1P47881 315 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 CEBPDP49716 269 aaPredicted RBP8.67□□□□□ -1.02
RFC1-211ENST00000509084 ATP5J2P56134 94 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 DEFA1P59665 94 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 DEFA3P59666 94 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 FLNCQ14315 2725 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 ZMYND11Q15326 602 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 GRK1Q15835 563 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 ACTBL2Q562R1 376 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 SLC35E4Q6ICL7 350 aa8.67□□□□□ -1.02
RFC1-211ENST00000509084 NLRC3Q7RTR2 1065 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms