RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ZG16BQ96DA0 208 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 ACY3Q96HD9 319 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 C4orf36Q96KX1 117 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 ZNF48Q96MX3 618 aaPredicted RBP2.59□□□□□ -2
NEDD4-208ENST00000508342 ZNF300Q96RE9 604 aaPredicted RBP2.59□□□□□ -2
NEDD4-208ENST00000508342 EBF4Q9BQW3 602 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 ARL6Q9H0F7 186 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 ZCCHC4Q9H5U6 513 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 C7orf69Q9H7B7 122 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 PRDM7Q9NQW5 492 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 DUSP22Q9NRW4 184 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 GPR173Q9NS66 373 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 ZNF446Q9NWS9 450 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 GAR1Q9NY12 217 aaKnown RBP2.59□□□□□ -2
NEDD4-208ENST00000508342 NPAP1Q9NZP6 1156 aa2.59□□□□□ -2
NEDD4-208ENST00000508342 ZFHX2Q9C0A1 2572 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 TCRBV4S1A1TA0A5B7 111 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 COX7A2P2O60397 106 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC22A5O76082 557 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 THBS4P35443 961 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 GABARAPL2P60520 117 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 DHODHQ02127 395 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 P2RY6Q15077 328 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SYPL1Q16563 259 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 GUK1Q16774 197 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CXorf66Q5JRM2 361 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 EBLN2Q6P2I7 272 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 DPY19L2P2Q6ZN68 376 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 GTPBP8Q8N3Z3 284 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 C17orf47Q8NEP4 570 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4M1Q8NGD0 313 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4A4PQ8NGN8 299 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR13C8Q8NGS7 320 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 AKR7LQ8NHP1 331 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SGMS2Q8NHU3 365 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ASB13Q8WXK3 278 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 AIG1Q9NVV5 245 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MRPL22Q9NWU5 206 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF281Q9Y2X9 895 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF816-ZNF321PA0A0X1KG74 233 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SERPINE3A8MV23 424 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 FAM106CPP0CH98 169 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 AKAIN1P0CW23 69 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 AREGP15514 252 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF14P17017 642 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 NUTF2P61970 127 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 DEGS2Q6QHC5 323 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SSX7Q7RTT5 188 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 TCF24Q7RTU0 167 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PACRGLQ8N7B6 248 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4F17Q8NGA8 305 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4X2Q8NGF9 303 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4F5Q8NH21 305 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 C8orf46Q8TAG6 207 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF431Q8TF32 576 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 SEH1LQ96EE3 360 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4F4Q96R69 305 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ACER3Q9NUN7 267 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 FKBP11Q9NYL4 201 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MEIS3P1A6NDR6 274 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 INMT-MINDY4F8WBC2 141 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 K7EM74 188 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 TERTO14746 1132 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 GNG7O60262 68 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SELENOFO60613 162 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZFPL1O95159 310 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 IL18BPO95998 194 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 METTL15P1P0C7V9 234 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 RAB5AP20339 215 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PSMB6P28072 239 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PPP1CCP36873 323 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 ETV6P41212 452 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 RIPPLY3P57055 190 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 RAC3P60763 192 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ROM1Q03395 351 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 EBPQ15125 230 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 IGFL3Q6UXB1 125 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC25A26Q70HW3 274 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ANGPTL5Q86XS5 388 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PHC2Q8IXK0 858 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR5B3Q8NH48 314 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 FAM110DQ8TAY7 271 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 ADAMTS17Q8TE56 1095 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 BCL2L2Q92843 193 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 LHX4Q969G2 390 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 STARD4Q96DR4 205 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 BTF3L4Q96K17 158 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 LINC00052Q96N35 136 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SIGLEC11Q96RL6 698 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF2Q9BSG1 426 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 SRXN1Q9BYN0 137 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SH3BGRL3Q9H299 93 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CXorf36Q9H7Y0 433 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 TMEM140Q9NV12 185 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 NECAP2Q9NVZ3 263 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CSAG2Q9Y5P2 127 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 UTRNP46939 3433 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 TMEM30CPA0ZSE6 113 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CDHR4A6H8M9 788 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PINLYPA6NC86 204 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms