RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NEK6Q9HC98 313 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 TAS2R3Q9NYW6 316 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 GMPPBQ9Y5P6 360 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 FUOMA2VDF0 154 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 TMEM212A6NML5 194 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 E9PI62 339 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 SLC33A1O00400 549 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ALX3O95076 343 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 PRB2P02812 416 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ZNF44P15621 663 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 CD24P25063 80 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ATXN7L3Q14CW9 347 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 KISS1Q15726 138 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 UTF1Q5T230 341 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 OR52W1Q6IF63 320 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ZFP1Q6P2D0 407 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 C16orf82Q7Z2V1 217 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 PARP16Q8N5Y8 322 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 CHST4Q8NCG5 386 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 PDCD1LG2Q9BQ51 273 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ZNF286AQ9HBT8 521 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 ERVK13-1Q9NX77 482 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 DPM3Q9P2X0 92 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 PCDHGB5Q9Y5G0 923 aa10.41□□□□□ -0.74
HMGCS1-205ENST00000508319 A0A087X0M5 115 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 A0A1B0GX30 115 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 PEX14O75381 377 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 ALDOBP05062 364 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 HCKP08631 526 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 PTGFRP43088 359 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 SCN1BQ07699 218 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 OXLD1Q5BKU9 147 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 KRBOX4Q5JUW0 171 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 SERPINA12Q8IW75 414 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 OR51T1Q8NGJ9 327 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 RHOXF1Q8NHV9 184 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 R3HDM4Q96D70 268 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 MRPL48Q96GC5 212 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 OR4F4Q96R69 305 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 PPIL3Q9H2H8 161 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 LIN7BQ9HAP6 207 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 INPP5EQ9NRR6 644 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 ING3Q9NXR8 418 aa10.4□□□□□ -0.74
HMGCS1-205ENST00000508319 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 LEUTXA8MZ59 168 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 XPNPEP2O43895 674 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 MPZL2O60487 215 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 FADS2O95864 444 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 AMY1AP04745 511 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 AMY2AP04746 511 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 CCDC159P0C7I6 412 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 TMEM225BP0DP42 221 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 CD83Q01151 205 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 EMX1Q04741 257 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 RAB40BQ12829 278 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 MRPL28Q13084 256 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 C17orf58Q2M2W7 97 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 ZNF691Q5VV52 312 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 LPCAT4Q643R3 524 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 ELP2Q6IA86 826 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 ZNF529Q6P280 563 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 Q6ZPA2 131 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 OR4D6Q8NGJ1 314 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 OR52I1Q8NGK6 324 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 OR5D14Q8NGL3 314 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 OR5AK2Q8NH90 309 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 TSEN15Q8WW01 171 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 APH1BQ8WW43 257 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 RGP1Q92546 391 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 AKR1E2Q96JD6 320 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 MYCBPQ99417 103 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 SLC29A1Q99808 456 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 C9orf16Q9BUW7 83 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 DHDHQ9UQ10 334 aa10.39□□□□□ -0.75
HMGCS1-205ENST00000508319 TRAV24A0A0B4J272 114 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 H0YJX3 145 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 LY6LH3BQJ8 138 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 BUB1B-PAK6H3BSN5 160 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 GABRPO00591 440 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 HSPB6O14558 160 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 DEGS1O15121 323 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 OR2F2O95006 317 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 RPSAP08865 295 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 LIMS3P0CW19 117 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 LIMS4P0CW20 117 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 CGB3P0DN86 165 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 CGB7P0DN87 165 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 BRS3P32247 399 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 GLP1RP43220 463 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 MTNR1BP49286 362 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 ZSCAN26Q16670 478 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 TCTEX1D4Q5JR98 221 aa10.38□□□□□ -0.75
HMGCS1-205ENST00000508319 TPTE2P1Q5T6R2 138 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms