RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 GPR22Q99680 433 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 PAIP2Q9BPZ3 127 aaKnown RBP2.54□□□□□ -2
TRAPPC13-209ENST00000508304 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
TRAPPC13-209ENST00000508304 TMEM208Q9BTX3 173 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 SPZ1Q9BXG8 430 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 MFSD1Q9H3U5 465 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 ASB7Q9H672 318 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 FGFR1OP2Q9NVK5 253 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 PLEKHJ1Q9NW61 149 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 FAM206AQ9NX38 181 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 CBY1Q9Y3M2 126 aa2.54□□□□□ -2
TRAPPC13-209ENST00000508304 LRP4O75096 1905 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 SLC31A1O15431 190 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 STX10O60499 249 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 PDCD6O75340 191 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 SOX14O95416 240 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 SEC11BP0C7V7 166 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 MLNP12872 115 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 UGT2B7P16662 529 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 HLA-DMAP28067 261 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 MPIP34949 423 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 HSPA13P48723 471 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 CLEC12BQ2HXU8 276 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 GOLGA7BQ2TAP0 167 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 Q499Y3 187 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 LUZP6Q538Z0 58 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 TIMM23BQ5SRD1 257 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 OGFRL1Q5TC84 451 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-209ENST00000508304 FAM71E1Q6IPT2 247 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 Q6ZR03 302 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 TPGS1Q6ZTW0 290 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 OR5L1Q8NGL2 311 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 OR4P4Q8NGL7 312 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 PPP1R14BQ96C90 147 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 DOK1Q99704 481 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 UGT2B28Q9BY64 529 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 ZNF430Q9H8G1 570 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-209ENST00000508304 TAC3Q9UHF0 121 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 NAGKQ9UJ70 344 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 YTHDF2Q9Y5A9 579 aaKnown RBP2.53□□□□□ -2
TRAPPC13-209ENST00000508304 ZNF706Q9Y5V0 76 aaPredicted RBP2.53□□□□□ -2
TRAPPC13-209ENST00000508304 SNX10Q9Y5X0 201 aa2.53□□□□□ -2
TRAPPC13-209ENST00000508304 TMEM131Q92545 1883 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 IGKV2-28A0A075B6P5 120 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 IGKV2D-24A0A075B6R9 120 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 IGHV1-3A0A0C4DH29 117 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 C7orf66A4D0T2 115 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 FAM183AA6NL82 134 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 BET1O15155 118 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 AHSA1O95433 338 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 CCNE2O96020 404 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 IGKV2D-28P01615 120 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 CECR9P0C854 216 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 HIST1H1CP16403 213 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 CELP19835 753 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 ELK4P28324 431 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 ADORA1P30542 326 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 ZNF83P51522 516 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 MYL6P60660 151 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 MAGOHP61326 146 aaKnown RBP2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 PAGE2Q7Z2X7 111 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 PRNTQ86SH4 94 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 UBALD1Q8TB05 177 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 FAM57AQ8TBR7 257 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 POMPQ9Y244 141 aa2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 NUP214P35658 2090 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC13-209ENST00000508304 CDC42BPBQ9Y5S2 1711 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 A0A1B0GXF2 115 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 ZNF233A6NK53 670 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CEACAM18A8MTB9 384 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 UPK1AO00322 258 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 PFDN6O15212 129 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 SLC16A4O15374 487 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 SYNGR1O43759 233 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CD74P04233 296 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 LINC00869P0C866 280 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 COX5BP10606 129 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CD28P10747 220 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 NEFHP12036 1026 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CD99P14209 185 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CFL1P23528 166 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 S100A2P29034 98 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 SLC6A1P30531 599 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 SULT1A2P50226 295 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CMC4P56277 68 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 LINC00315P59091 139 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 SLC36A2Q495M3 483 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 LINC00483Q53H64 154 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CLLU1OSQ5K130 101 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 DRAM2Q6UX65 266 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 ZNF461Q8TAF7 563 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 STOML3Q8TAV4 291 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 C2orf15Q8WU43 125 aaKnown RBP2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CYGBQ8WWM9 190 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 CCL17Q92583 94 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 FRZBQ92765 325 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 OLFM3Q96PB7 478 aa2.51□□□□□ -2.01
TRAPPC13-209ENST00000508304 THTPAQ9BU02 230 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms