RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 B4GALT6Q9UBX8 382 aa9.41□□□□□ -0.9
PDLIM5-210ENST00000508216 HSPB8Q9UJY1 196 aa9.41□□□□□ -0.9
PDLIM5-210ENST00000508216 VPREB3Q9UKI3 123 aa9.41□□□□□ -0.9
PDLIM5-210ENST00000508216 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 MPZL1O95297 269 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 PRH1P02810 166 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 IRF1P10914 325 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 DNASE1L1P49184 302 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 MRPS34P82930 218 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 ZNF266Q14584 549 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 FAM110CQ1W6H9 321 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 LRRC69Q6ZNQ3 347 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 Q7L0L9 218 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 ADAD2Q8NCV1 583 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 CADM4Q8NFZ8 388 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 RERGQ96A58 199 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 WDYHV1Q96HA8 205 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 SLC25A18Q9H1K4 315 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 THYN1Q9P016 225 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 GPR132Q9UNW8 380 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 UTRNP46939 3433 aa9.4□□□□□ -0.9
PDLIM5-210ENST00000508216 ZNF736B4DX44 427 aaPredicted RBP9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 SHISA8B8ZZ34 492 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 PIN1P1O15428 100 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 SFT2D2O95562 160 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CPSF4O95639 269 aaKnown RBP9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 DDAH2O95865 285 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 NUDT3O95989 172 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CYB5AP00167 134 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 KLKB1P03952 638 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 COX7A2P14406 83 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF708P17019 499 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 GALR1P47211 349 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 RRADP55042 308 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 GFRA1P56159 465 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 SEC11AP67812 179 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 RAB32Q13637 225 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 ELAVL3Q14576 367 aaKnown RBP9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 NOXRED1Q6NXP6 359 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 C19orf35Q6ZS72 473 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 FA2HQ7L5A8 372 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CLECL1Q8IZS7 167 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF295-AS1Q8N0V1 137 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CLDN19Q8N6F1 224 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 NPWQ8N729 165 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 KISS1RQ969F8 398 aaPredicted RBP9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 ZDHHC11Q9H8X9 412 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 MANBALQ9NQG1 85 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 FAM206AQ9NX38 181 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 VDAC3Q9Y277 283 aa9.4□□□□□ -0.91
PDLIM5-210ENST00000508216 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 SPAARA0A1B0GVQ0 90 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 M0QXV9 152 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 MLNRO43193 412 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 DEDDO75618 318 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 SLC2A10O95528 541 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 CEACAM5P06731 702 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 EDNRAP25101 427 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 SERPINA4P29622 427 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 WASP42768 502 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 SUMO3P55854 103 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF85Q03923 595 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 FUT5Q11128 374 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 ALKBH6Q3KRA9 238 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 FCRL6Q6DN72 434 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 WBP2NLQ6ICG8 309 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 TMEM150AQ86TG1 271 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 TP53INP2Q8IXH6 220 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 SLC35F2Q8IXU6 374 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 TMEM99Q8N816 258 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 OR2AJ1Q8NGZ0 328 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 NRGNQ92686 78 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 CHRNA10Q9GZZ6 450 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 ST20Q9HBF5 79 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 MED29Q9NX70 200 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 HS3ST2Q9Y278 367 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 TSSC4Q9Y5U2 329 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF780BQ9Y6R6 833 aa9.39□□□□□ -0.91
PDLIM5-210ENST00000508216 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 C13orf42A0A1B0GVH6 325 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 F2RL2O00254 374 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 HS3ST1O14792 307 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 NUPR1O60356 82 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF217O75362 1048 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 EDN1P05305 212 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 RHOQP17081 205 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 MANFP55145 182 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 LINC00310P59036 64 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 RHOBP62745 196 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 GNG3P63215 75 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 SPEM2Q0P670 501 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 ADIRFQ15847 76 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 ASCL4Q6XD76 172 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 ZNF788Q6ZQV5 615 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 BHLHA9Q7RTU4 235 aa9.38□□□□□ -0.91
PDLIM5-210ENST00000508216 PRRT2Q7Z6L0 340 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms