RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CHST6Q9GZX3 395 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 PPA2Q9H2U2 334 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 ZNF665Q9H7R5 613 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 SCPEP1Q9HB40 452 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 IFT46Q9NQC8 304 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.62□□□□□ -0.07
RNF4-209ENST00000507784 ETAA1Q9NY74 926 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 PLEKHA6Q9Y2H5 1048 aa14.62□□□□□ -0.07
RNF4-209ENST00000507784 LANCL1O43813 399 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 SSX4O60224 188 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 RP2O75695 350 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 GLAP06280 429 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 LPLP06858 475 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 KRTAP10-9P60411 292 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 BTG1P62324 171 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 STUMQ69YW2 141 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 ANGPTL6Q8NI99 470 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 PPP1R35Q8TAP8 253 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 GPX8Q8TED1 209 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 IGFBPL1Q8WX77 278 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 RAB1CQ92928 201 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 HDHD3Q9BSH5 251 aaPredicted RBP14.61□□□□□ -0.07
RNF4-209ENST00000507784 KLK11Q9UBX7 282 aa14.61□□□□□ -0.07
RNF4-209ENST00000507784 SPTAN1Q13813 2472 aaKnown RBP14.6□□□□□ -0.07
RNF4-209ENST00000507784 TMEM82A0PJX8 343 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 ORC5O43913 435 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 SSX5O60225 188 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 CA11O75493 328 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 LMO1P25800 156 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 GDNFP39905 211 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 ATXN7L3Q14CW9 347 aaPredicted RBP14.6□□□□□ -0.07
RNF4-209ENST00000507784 ZMYND11Q15326 602 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 KCNJ8Q15842 424 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 OR4S1Q8NGB4 309 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 GAFA1Q96PS6 74 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 ST6GALNAC5Q9BVH7 336 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 CHODLQ9H9P2 273 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 SEBOXQ9HB31 216 aaPredicted RBP14.6□□□□□ -0.07
RNF4-209ENST00000507784 TMEM165Q9HC07 324 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 ZNF701Q9NV72 531 aaPredicted RBP14.6□□□□□ -0.07
RNF4-209ENST00000507784 ZNF222Q9UK12 451 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 DOPEY2Q9Y3R5 2298 aa14.6□□□□□ -0.07
RNF4-209ENST00000507784 UTP20O75691 2785 aaKnown RBP14.6□□□□□ -0.07
RNF4-209ENST00000507784 TENM4Q6N022 2769 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 A0A1W2PQ09 198 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 PSPNO60542 156 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 IGHV4-39P01824 125 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 GSTT2BP0CG30 244 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 AMY2BP19961 511 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 MDH2P40926 338 aaKnown RBP14.59□□□□□ -0.07
RNF4-209ENST00000507784 CBX5P45973 191 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 ATP5J2P56134 94 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 IFITM3Q01628 133 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 GRK1Q15835 563 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 LYPD2Q6UXB3 125 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 TOMM5Q8N4H5 51 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 ZNF561Q8N587 486 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 GVQW1Q8N7I0 195 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 ZNRF1Q8ND25 227 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 TMEM185AQ8NFB2 350 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 PLPPR1Q8TBJ4 325 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 SNX22Q96L94 193 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 TMEM246Q9BRR3 403 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 MTFP1Q9UDX5 166 aa14.59□□□□□ -0.07
RNF4-209ENST00000507784 A0A1B0GW55 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 ADAM20O43506 726 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L2P0CJ85 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L3P0CJ86 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L4P0CJ87 422 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L5P0CJ88 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L6P0CJ89 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L7P0CJ90 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 GPR6P46095 362 aaPredicted RBP14.58□□□□□ -0.08
RNF4-209ENST00000507784 OR3A1P47881 315 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 TMEM33P57088 247 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 STEAP3Q658P3 488 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4L9Q6RFH8 374 aaPredicted RBP14.58□□□□□ -0.08
RNF4-209ENST00000507784 ZNF788Q6ZQV5 615 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 LYSMD2Q8IV50 215 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 FAM216BQ8N7L0 139 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 MAFIPQ8WZ33 124 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 PERPQ96FX8 193 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 SDSLQ96GA7 329 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 MED30Q96HR3 178 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 DUX4Q9UBX2 424 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 ZNF230Q9UIE0 474 aaPredicted RBP14.58□□□□□ -0.08
RNF4-209ENST00000507784 EDARQ9UNE0 448 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 MAB21L2Q9Y586 359 aa14.58□□□□□ -0.08
RNF4-209ENST00000507784 TMPRSS2O15393 492 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 NDUFA2O43678 99 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 IGHV2-70P01814 119 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 SELLP14151 372 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 RCVRNP35243 200 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 PDLIM4P50479 330 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 ACTBP60709 375 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 ACTG1P63261 375 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 IL13RA1P78552 427 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 AESQ08117 197 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 EDDM3AQ14507 147 aa14.57□□□□□ -0.08
RNF4-209ENST00000507784 ATPAF1Q5TC12 328 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms