RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CALHM2Q9HA72 323 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 SPACA1Q9HBV2 294 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 SMCO4Q9NRQ5 59 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 C19orf12Q9NSK7 152 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 LRFN1Q9P244 771 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 IL36RNQ9UBH0 155 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMED3Q9Y3Q3 217 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 POMT1Q9Y6A1 747 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 FAM24AA6NFZ4 105 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 CER1O95813 267 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 CELA3AP09093 270 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 SCTP09683 121 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 FOXG1P55316 489 aaPredicted RBP6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 UCP3P55916 312 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 GFRA1P56159 465 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 POLR2GP62487 172 aaKnown RBP eCLIP6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM182Q6ZP80 229 aaPredicted RBP6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 TBC1D26Q86UD7 250 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF695Q8IW36 515 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 TUSC5Q8IXB3 177 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 DMBX1Q8NFW5 382 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 FAM213BQ8TBF2 198 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 CT55Q8WUE5 264 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 ISOC2Q96AB3 205 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 THOC3Q96J01 351 aaKnown RBP6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 IP6K3Q96PC2 410 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 C12orf57Q99622 126 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 ARV1Q9H2C2 271 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 CRIM1Q9NZV1 1036 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 FBXO7Q9Y3I1 522 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 KLF2Q9Y5W3 355 aaPredicted RBP6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 KPTNQ9Y664 436 aa6.56□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF98A6NK75 572 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 RPL36A-HNRNPH2H7BZ11 118 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 SSSCA1O60232 199 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 IGHEP01854 428 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TK1P04183 234 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 ITGA3P26006 1051 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 EWSR1Q01844 656 aaKnown RBP eCLIP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 FOXO1Q12778 655 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 PRDX4Q13162 271 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 SSPNQ14714 243 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TGIF1Q15583 401 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TSC22D1Q15714 1073 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 SHEQ5VZ18 495 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 C6orf15Q6UXA7 325 aaPredicted RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF818PQ6ZRF7 136 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 DPPA2Q7Z7J5 298 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 WDR5BQ86VZ2 330 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 GAPTQ8N292 157 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF565Q8N9K5 539 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 CD300LFQ8TDQ1 290 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 SPSB4Q96A44 273 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TECTBQ96PL2 329 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 PRRG4Q9BZD6 226 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM222Q9H0R3 208 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 PRDM6Q9NQX0 595 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 SHANK1Q9Y566 2161 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 C7orf77A4D0Y5 90 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 C3orf80F5H4A9 247 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 HSD17B6O14756 317 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 GPR37O15354 613 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 LAMTOR5O43504 91 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TNFSF12O43508 249 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 NGFP01138 241 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR13C7P0DN81 318 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF44P15621 663 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 SNRPEP62304 92 aaKnown RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 AWAT1Q58HT5 328 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 CXorf66Q5JRM2 361 aaPredicted RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 MRPL21Q7Z2W9 205 aaKnown RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 UBALD2Q8IYN6 164 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR2C3Q8N628 320 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM217Q8N7C4 229 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR4D5Q8NGN0 318 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 BOD1Q96IK1 185 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 USB1Q9BQ65 265 aaKnown RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 REPIN1Q9BWE0 567 aaKnown RBP6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 HES7Q9BYE0 225 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 PRDM14Q9GZV8 571 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 LOXL2Q9Y4K0 774 aa6.55□□□□□ -1.36
PPARGC1A-204ENST00000506055 IGKV1D-13A0A0B4J2D9 117 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 PQLC2LA1A4F0 135 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF503-AS2A6NEH8 195 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 FAM166BA8MTA8 275 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF732B4DXR9 585 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 TRDCB7Z8K6 153 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 UMAD1C9J7I0 102 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 HS3ST1O14792 307 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ADAM20O43506 726 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 SERPINA7P05543 415 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 IGKV1-13P0DP09 117 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 HOXA6P31267 233 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 KRBOX4Q5JUW0 171 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM105Q8N8V8 129 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZFP62Q8NB50 900 aaPredicted RBP6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR2G3Q8NGZ4 309 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 HPSE2Q8WWQ2 592 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 PSMF1Q92530 271 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms