RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 Q6ZR03 302 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 WDR86Q86TI4 376 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 C12orf45Q8N5I9 185 aaPredicted RBP6.84□□□□□ -1.31
COL4A5-208ENST00000505728 POC1AQ8NBT0 407 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 NUP37Q8NFH4 326 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 ASB13Q8WXK3 278 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 ZNF486Q96H40 463 aaPredicted RBP6.84□□□□□ -1.31
COL4A5-208ENST00000505728 RADILQ96JH8 1075 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 HYLS1Q96M11 299 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 DHRS9Q9BPW9 319 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 NRIP2Q9BQI9 281 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 ZNF436Q9C0F3 470 aaPredicted RBP6.84□□□□□ -1.31
COL4A5-208ENST00000505728 TLNRD1Q9H1K6 362 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 NECAP2Q9NVZ3 263 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 EHFQ9NZC4 300 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 MGAT4CQ9UBM8 478 aa6.84□□□□□ -1.31
COL4A5-208ENST00000505728 ZNF230Q9UIE0 474 aaPredicted RBP6.84□□□□□ -1.31
COL4A5-208ENST00000505728 TEP1Q99973 2627 aaKnown RBP6.84□□□□□ -1.31
COL4A5-208ENST00000505728 CHD3Q12873 2000 aaKnown RBP6.84□□□□□ -1.31
COL4A5-208ENST00000505728 IGLV3-9A0A075B6K5 115 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 H7C1Q1 480 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 CDIPTO14735 213 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SH2D1BO14796 132 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 FABP7O15540 132 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 MLNRO43193 412 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 RHBDL1O75783 438 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SNAPC5O75971 98 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 OR2A4O95047 310 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 NXPH2O95156 264 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 NAPSAO96009 420 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 GRPP07492 148 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 GIPP09681 153 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 CTXN2P0C2S0 81 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 GSTT2P0CG29 244 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 OR5H8P0DN80 308 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 CXCL3P19876 107 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 ZBTB25P24278 435 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 FPR2P25090 351 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 MDH2P40926 338 aaKnown RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 CD200P41217 278 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 RAP2BP61225 183 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 IKZF1Q13422 519 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 ZNF146Q15072 292 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 PDCD1Q15116 288 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 C4orf17Q53FE4 359 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SPIN3Q5JUX0 258 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SHEQ5VZ18 495 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 BRICD5Q6PL45 260 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 TMEM108Q6UXF1 575 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 TMED4Q7Z7H5 227 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 LYG2Q86SG7 212 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 PEG10Q86TG7 708 aaKnown RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 C11orf53Q8IXP5 236 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 MUC20Q8N307 709 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 ZBTB8BQ8NAP8 495 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SUMF2Q8NBJ7 301 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 GALNT11Q8NCW6 608 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 OR2AK2Q8NG84 335 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 OR52B4Q8NGK2 314 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 OR10Z1Q8NGY1 313 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 ZFAND1Q8TCF1 268 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 MARCH1Q8TCQ1 289 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 CAPSLQ8WWF8 208 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 MAFIPQ8WZ33 124 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 MRGPRFQ96AM1 343 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 HS3ST6Q96QI5 342 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 OR2A7Q96R45 310 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 HDHD3Q9BSH5 251 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SEBOXQ9HB31 216 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 HES4Q9HCC6 221 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 CHMP1AQ9HD42 196 aaPredicted RBP6.83□□□□□ -1.32
COL4A5-208ENST00000505728 Q9N2K0 584 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 NGBQ9NPG2 151 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 C12orf4Q9NQ89 552 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 DLL4Q9NR61 685 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 DECR2Q9NUI1 292 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 TREM2Q9NZC2 230 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 ZNF581Q9P0T4 197 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 GLS2Q9UI32 602 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 SH3BGRL2Q9UJC5 107 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 KIAA2026Q5HYC2 2103 aa6.83□□□□□ -1.32
COL4A5-208ENST00000505728 IGKV1D-8A0A087WSZ0 117 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 TRAV24A0A0B4J272 114 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 A0A0B4J2A0 478 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 KIR2DS1A0A191URI9 304 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 C9orf170A2RU37 121 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 VSTM5A8MXK1 200 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 F5H5P2 479 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 SDCBPO00560 298 aaPredicted RBP6.82□□□□□ -1.32
COL4A5-208ENST00000505728 SLC22A5O76082 557 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 PTBP3O95758 552 aaKnown RBP6.82□□□□□ -1.32
COL4A5-208ENST00000505728 ZNF44P15621 663 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 HLA-GP17693 338 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 LMO1P25800 156 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 CD34P28906 385 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 CCKARP32238 428 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 CFHR2P36980 270 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 KIR2DS4P43632 304 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 ASCL1P50553 236 aa6.82□□□□□ -1.32
COL4A5-208ENST00000505728 NKX2-5P52952 324 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms