RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 FAM106CPP0CH98 169 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 KDELR2P33947 212 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 SELENOWP63302 87 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 GABPB1Q06547 395 aaPredicted RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 CEACAM21Q3KPI0 293 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 TEX30Q5JUR7 227 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 PRAMEF5Q5TYX0 476 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 FAM53AQ6NSI3 398 aaPredicted RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 WDR93Q6P2C0 686 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 ACSM6Q6P461 480 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 RTN4RL2Q86UN3 420 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 HAPLN4Q86UW8 402 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 CATSPERDQ86XM0 798 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 SGPP2Q8IWX5 399 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 TIGD4Q8IY51 512 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 TPRX1Q8N7U7 411 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 ASCC1Q8N9N2 400 aaKnown RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 ZBTB8BQ8NAP8 495 aaPredicted RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 OR51L1Q8NGJ5 315 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 OR1N2Q8NGR9 330 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 OR56B4Q8NH76 319 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 ZNF596Q8TC21 504 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 FANK1Q8TC84 345 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 RNF133Q8WVZ7 376 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 DLX4Q92988 240 aaPredicted RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 ZBTB9Q96C00 473 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 C8orf49Q96NF6 230 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 ST6GALNAC5Q9BVH7 336 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 OR52D1Q9H346 318 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 ZNF286AQ9HBT8 521 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 KRCC1Q9NPI7 259 aaPredicted RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 TAS2R3Q9NYW6 316 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 CD300AQ9UGN4 299 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 SLC22A13Q9Y226 551 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 A0A087WWL8 130 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 TRBV4-1A0A0J9YWV2 114 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 hADV38S2A0JD32 116 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 OR5B21A6NL26 309 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 HSPA12AO43301 675 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 BRI3O95415 125 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 IFNA14P01570 189 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 TMEM11P17152 192 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 SLC6A6P31641 620 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 OPRL1P41146 370 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 ERVK11-1P61568 191 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 SCN1BQ07699 218 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 EDDM3AQ14507 147 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 MED22Q15528 200 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 KRT71Q3SY84 523 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 DGAT2L7PQ6IED9 249 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 GDPD3Q7L5L3 318 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 Q8N1X5 172 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 POC5Q8NA72 575 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 PROKR2Q8NFJ6 384 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 OR5A2Q8NGI9 324 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 ANP32BQ92688 251 aaKnown RBP5.35□□□□□ -1.55
VCAN-206ENST00000505615 ARPC1AQ92747 370 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 PGAM5Q96HS1 289 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 NR1H4Q96RI1 486 aaPredicted RBP5.35□□□□□ -1.55
VCAN-206ENST00000505615 ABHD1Q96SE0 405 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 AMELYQ99218 206 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 CCDC28BQ9BUN5 200 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 VIPAS39Q9H9C1 493 aa5.35□□□□□ -1.55
VCAN-206ENST00000505615 A0A1B0GVY2 172 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 A4D1N5 150 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 C12orf77C9JDV5 145 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 BOLA2-SMG1P6H3BVE0 249 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 ZNF593O00488 134 aaPredicted RBP5.34□□□□□ -1.55
VCAN-206ENST00000505615 ANGPT2O15123 496 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 RGS16O15492 202 aaPredicted RBP5.34□□□□□ -1.55
VCAN-206ENST00000505615 IDH3BO43837 385 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 SLPIP03973 132 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 CD1AP06126 327 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 ARSBP15848 533 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 CDK2P24941 298 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 MPZP25189 248 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 HSD11B1P28845 292 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 CEACAM3P40198 252 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 MNDAP41218 407 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 KIR3DL2P43630 455 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 SLC15A1P46059 708 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 DGCR6Q14129 220 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 DIAPH2-AS1Q14236 149 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 HNF4GQ14541 408 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 IRF3Q14653 427 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 ERICH5Q6P6B1 374 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 HEPN1Q6WQI6 88 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 LINC00322Q6ZN03 302 aaPredicted RBP5.34□□□□□ -1.55
VCAN-206ENST00000505615 RRM2BQ7LG56 351 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 PQLC1Q8N2U9 271 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 ZNF491Q8N8L2 437 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 Q8N9W7 124 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 OR8B12Q8NGG6 310 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 OR2T4Q8NH00 348 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.34□□□□□ -1.55
VCAN-206ENST00000505615 ITFG2Q969R8 447 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 EME1Q96AY2 570 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 UBE2E2Q96LR5 201 aa5.34□□□□□ -1.55
VCAN-206ENST00000505615 CMTM3Q96MX0 182 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms