RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RP2O75695 350 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 RBBP9O75884 186 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 GOSR1O95249 250 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 HAND1O96004 215 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 CYB5R3P00387 301 aaPredicted RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 MT-ND4P03905 459 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 CD3DP04234 171 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 GLAP06280 429 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 FCER2P06734 321 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 FCGR3AP08637 254 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L2P0CJ85 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L3P0CJ86 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 PSG2P11465 335 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 GLRA1P23415 457 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 RCVRNP35243 200 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 OR3A1P47881 315 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 GNG2P59768 71 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 GMFBP60983 142 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 PCGF3Q3KNV8 242 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 ZNF57Q68EA5 555 aaPredicted RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4L9Q6RFH8 374 aaPredicted RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 C17orf107Q6ZR85 190 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 C5orf24Q7Z6I8 188 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 FAM90A1Q86YD7 464 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 C19orf18Q8NEA5 215 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUSP18Q8NEJ0 188 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 ANGPTL6Q8NI99 470 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 MRPL30Q8TCC3 161 aaKnown RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 CHAC2Q8WUX2 184 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 PHF21AQ96BD5 680 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 UPRTQ96BW1 309 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 COQ2Q96H96 371 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 DPCDQ9BVM2 203 aaPredicted RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 TINAGL1Q9GZM7 467 aaPredicted RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 SHARPINQ9H0F6 387 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 PLEKHF2Q9H8W4 249 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 CBLN4Q9NTU7 201 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 PLEKHJ1Q9NW61 149 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 RASL12Q9NYN1 266 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 TREM2Q9NZC2 230 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 RNF7Q9UBF6 113 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 ZNF230Q9UIE0 474 aaPredicted RBP8.7□□□□□ -1.02
TPM3-217ENST00000504663 IGHV3OR15-7A0A075B7D8 119 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 hCG_1807616A0A1W2PRN6 198 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 TMEM178BH3BS89 294 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 ECDO95905 644 aaPredicted RBP8.69□□□□□ -1.02
TPM3-217ENST00000504663 CSF1P09603 554 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 TNFSF4P23510 183 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 DTYMKP23919 212 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 DEFA1P59665 94 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 DEFA3P59666 94 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 ACTBP60709 375 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 SNRPD2P62316 118 aaKnown RBP8.69□□□□□ -1.02
TPM3-217ENST00000504663 ACTG1P63261 375 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 PAX5Q02548 391 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 ARL6IP1Q15041 203 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 MICBQ29980 383 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 SMIM21Q3B7S5 101 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 ATAD3CQ5T2N8 411 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 RSBN1Q5VWQ0 802 aaPredicted RBP8.69□□□□□ -1.02
TPM3-217ENST00000504663 CCBE1Q6UXH8 406 aaPredicted RBP8.69□□□□□ -1.02
TPM3-217ENST00000504663 Q6ZS49 121 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 THNSL2Q86YJ6 484 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 BPIFB2Q8N4F0 458 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 MINDY2Q8NBR6 621 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 DEDD2Q8WXF8 326 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 COX4I2Q96KJ9 171 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 MMP28Q9H239 520 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 MS4A5Q9H3V2 200 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 SAP30LQ9HAJ7 183 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 DYNLRB1Q9NP97 96 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 NLKQ9UBE8 527 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 PFDN2Q9UHV9 154 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 WIPI2Q9Y4P8 454 aa8.69□□□□□ -1.02
TPM3-217ENST00000504663 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
TPM3-217ENST00000504663 NBPF19A0A087WUL8 3843 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 RFPL4AA6NLU0 287 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 RFPL4AL1F8VTS6 287 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 IFNL4K9M1U5 179 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 M0QYG6 137 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 HSPB6O14558 160 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 SELLP14151 372 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 HLA-DMAP28067 261 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 CCR6P51684 374 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 TAS2R19P59542 299 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 COL10A1Q03692 680 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 TLE4Q04727 773 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 VAX1Q5SQQ9 334 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 ZNF660Q6AZW8 331 aaPredicted RBP8.68□□□□□ -1.02
TPM3-217ENST00000504663 STEAP1BQ6NZ63 245 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 ZNF497Q6ZNH5 498 aa8.68□□□□□ -1.02
TPM3-217ENST00000504663 OR5T2Q8NGG2 359 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms