RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IGHV4-30-2A0A087WSY4 118 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 TMEM82A0PJX8 343 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 ZNF737O75373 536 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 GNB3P16520 340 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 IL13RA1P78552 427 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 SLC36A1Q7Z2H8 476 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 FAM216BQ8N7L0 139 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 MED30Q96HR3 178 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 NUDT16L1Q9BRJ7 211 aaKnown RBP17■□□□□ 0.31
CDC42SE2-206ENST00000503291 DPCDQ9BVM2 203 aaPredicted RBP17■□□□□ 0.31
CDC42SE2-206ENST00000503291 KAAG1Q9UBP8 84 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 HSF4Q9ULV5 492 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 KCNK7Q9Y2U2 307 aa17■□□□□ 0.31
CDC42SE2-206ENST00000503291 NKX6-3A6NJ46 265 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 VWC2LB2RUY7 222 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 SIGLEC5O15389 551 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 SELLP14151 372 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 NR4A2P43354 598 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 CDNFQ49AH0 187 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 PAN3Q58A45 887 aaKnown RBP16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 CCDC190Q86UF4 302 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 SPICQ8N5J4 248 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 PECRQ9BY49 303 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 CHST6Q9GZX3 395 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 SHARPINQ9H0F6 387 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 PPA2Q9H2U2 334 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 MCRIP1C9JLW8 97 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 HIST1H1DP16402 221 aaKnown RBP16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 LINC00299Q6ZSB3 139 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 SNX22Q96L94 193 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 SULT4A1Q9BR01 284 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 CTSZQ9UBR2 303 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 PCDHB10Q9UN67 800 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 VPS13CQ709C8 3753 aa16.99■□□□□ 0.31
CDC42SE2-206ENST00000503291 FABP12A6NFH5 140 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 K7N7A8 449 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 HLA-DQB1P01920 261 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 TAS2R20P59543 309 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 ZNF260Q3ZCT1 412 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 Q5PR19 223 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 OLFML2AQ68BL7 652 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 OR4S1Q8NGB4 309 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 MIOXQ9UGB7 285 aa16.98■□□□□ 0.31
CDC42SE2-206ENST00000503291 UBE2QL1A1L167 161 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 MFNGO00587 321 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 TK1P04183 234 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 WNT2P09544 360 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 PRSS57Q6UWY2 283 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 TMEM185AQ8NFB2 350 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 NEK7Q8TDX7 302 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 ELF5Q9UKW6 265 aaPredicted RBP16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 GLAP06280 429 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 PTHLHP12272 177 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 RPS2P15880 293 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 OR3A1P47881 315 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 RBM39Q14498 530 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 SPANXN2Q5MJ10 180 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 ST8SIA4Q92187 359 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 SOSTQ9BQB4 213 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 AUNIPQ9H7T9 357 aa16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 PATZ1Q9HBE1 687 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-206ENST00000503291 A0A0G2JMP0 313 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 A0A0X1KG70 313 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 DVL1O14640 695 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 FCN3O75636 299 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 ETV6P41212 452 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 IL18Q14116 193 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 ARL6IP1Q15041 203 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 GRK1Q15835 563 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 KRTAP1-3Q8IUG1 177 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 OR8H2Q8N162 312 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 OR4M2Q8NGB6 313 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 PPP1R35Q8TAP8 253 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 ABHD1Q96SE0 405 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 FAM234AQ9H0X4 552 aa16.96■□□□□ 0.31
CDC42SE2-206ENST00000503291 TMEM235A6NFC5 223 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 NDUFB3O43676 98 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 GSTP1P09211 210 aaKnown RBP16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 MNDAP41218 407 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 ATXN7L3Q14CW9 347 aaPredicted RBP16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 FAM131AQ6UXB0 335 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 NLRC3Q7RTR2 1065 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 SNX29P2Q8IUI4 249 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 FGFRL1Q8N441 504 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 OR5D13Q8NGL4 314 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 DYRK2Q92630 601 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 NEIL1Q96FI4 390 aaPredicted RBP16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 FOXC2Q99958 501 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.96■□□□□ 0.31e-6■■■■□ 23.3
CDC42SE2-206ENST00000503291 ING3Q9NXR8 418 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 SLC25A10Q9UBX3 287 aaPredicted RBP16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 V9GYH0 126 aa16.96■□□□□ 0.3
CDC42SE2-206ENST00000503291 CCDC168Q8NDH2 2452 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 CSN2P05814 226 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 LRRC10Q5BKY1 277 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 ZNF841Q6ZN19 808 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 OR8B3Q8NGG8 313 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 CLDND2Q8NHS1 167 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 OR8B2Q96RD0 313 aa16.95■□□□□ 0.3
CDC42SE2-206ENST00000503291 AK3Q9UIJ7 227 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms