RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PRSS50Q9UI38 385 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 SLC7A11Q9UPY5 501 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 FREM1Q5H8C1 2179 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 TRAV25A0A0B4J276 109 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 SLC22A20A6NK97 555 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 SERPINE3A8MV23 424 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 PRR33A8MZF0 331 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 SLC22A5O76082 557 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 CD79AP11912 226 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 AMY2BP19961 511 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 AGTR1P30556 359 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 SSTR2P30874 369 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 ARR3P36575 388 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 FUT6P51993 359 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 GAGE1Q13065 139 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
USP46-204ENST00000503060 RSU1Q15404 277 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 ZBTB37Q5TC79 503 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 PIGCQ92535 297 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 FREM2Q5SZK8 3169 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 HEXAP06865 529 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 AGAP20933 346 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 GABRR1P24046 479 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 ZBTB25P24278 435 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 CD80P33681 288 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 ATP1B3P54709 279 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 PLCXD3Q63HM9 321 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 RTL6Q6ICC9 239 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 FAM58AQ8N1B3 248 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 ARRDC1Q8N5I2 433 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 PRSS33Q8NF86 280 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 OR5H2Q8NGV7 314 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 ASB13Q8WXK3 278 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 TECTBQ96PL2 329 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 LPAR2Q9HBW0 351 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 FAM86C1Q9NVL1 165 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 EP300Q09472 2414 aaPredicted RBP9.97□□□□□ -0.81
USP46-204ENST00000503060 C5orf49A4QMS7 147 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 RGS11O94810 467 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 IL2RAP01589 272 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 HLA-AP01891 365 aaKnown RBP9.97□□□□□ -0.81
USP46-204ENST00000503060 CD34P28906 385 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 RAB1AP62820 205 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 GPR157Q5UAW9 335 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 IGFL2Q6UWQ7 119 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 LYG2Q86SG7 212 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 RNASE8Q8TDE3 154 aaKnown RBP9.97□□□□□ -0.81
USP46-204ENST00000503060 ZNF2Q9BSG1 426 aaPredicted RBP9.97□□□□□ -0.81
USP46-204ENST00000503060 ALKBH7Q9BT30 221 aaPredicted RBP9.97□□□□□ -0.81
USP46-204ENST00000503060 ST6GALNAC5Q9BVH7 336 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 GP6Q9HCN6 339 aa9.97□□□□□ -0.81
USP46-204ENST00000503060 HOXD4P09016 255 aaPredicted RBP9.96□□□□□ -0.81
USP46-204ENST00000503060 AREGP15514 252 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 RPA2P15927 270 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 SNU13P55769 128 aaKnown RBP9.96□□□□□ -0.81
USP46-204ENST00000503060 PPP1R1AQ13522 171 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 SLC9A3R2Q15599 337 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 NKAPLQ5M9Q1 402 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 LY6G6FQ5SQ64 297 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 FAHD2BQ6P2I3 314 aaPredicted RBP9.96□□□□□ -0.81
USP46-204ENST00000503060 TEX261Q6UWH6 196 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 C6orf201Q7Z4U5 140 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 CSNK2A3Q8NEV1 391 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 PXT1Q8NFP0 134 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 OR2D3Q8NGH3 330 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 TERB2Q8NHR7 220 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 MARCH1Q8TCQ1 289 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 APOBEC3DQ96AK3 386 aaPredicted RBP9.96□□□□□ -0.81
USP46-204ENST00000503060 ELMOD3Q96FG2 381 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 FAHD2AQ96GK7 314 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 DIRC2Q96SL1 478 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 PFDN5Q99471 154 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 PLEKHJ1Q9NW61 149 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 MTCH1Q9NZJ7 389 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 MIOXQ9UGB7 285 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 NDRG3Q9UGV2 375 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 ZNF230Q9UIE0 474 aaPredicted RBP9.96□□□□□ -0.81
USP46-204ENST00000503060 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 NOP16Q9Y3C1 178 aaKnown RBP9.96□□□□□ -0.81
USP46-204ENST00000503060 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 U3KQ87 197 aa9.96□□□□□ -0.81
USP46-204ENST00000503060 IGKV1-12A0A0C4DH73 117 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 ZNHIT1O43257 154 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 SNAPC5O75971 98 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 BRI3O95415 125 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 IGKV1D-12P01611 117 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 CXCL2P19875 107 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 MPGP29372 298 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 TAS2R46P59540 309 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 PLP2Q04941 152 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 TNFRSF9Q07011 255 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 PDZK1IP1Q13113 114 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 GRK1Q15835 563 aa9.96□□□□□ -0.82
USP46-204ENST00000503060 TAF9Q16594 264 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms