RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DUSP1P28562 367 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 PMELP40967 661 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 F2RL1P55085 397 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 C3AR1Q16581 482 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-204ENST00000501271 FBXW12Q6X9E4 464 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 MEX3BQ6ZN04 569 aaKnown RBP8.46□□□□□ -1.05
CLIP1-204ENST00000501271 LINC00696Q6ZRV3 163 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 OR8U1Q8NH10 309 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 SYT3Q9BQG1 590 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 ARV1Q9H2C2 271 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 LNP1A1A4G5 178 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 FAM157AC9JC47 383 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 RNASEK-C17orf49H0YIS7 233 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 HSPB6O14558 160 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 SS18L1O75177 396 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-204ENST00000501271 CD5P06127 495 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF883P0CG24 379 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 SPINK2P20155 84 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 GNRHRP30968 328 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 CD80P33681 288 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 FGF12P61328 243 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 MRPL21Q7Z2W9 205 aaKnown RBP8.46□□□□□ -1.06
CLIP1-204ENST00000501271 ZDHHC23Q8IYP9 409 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 SPAG16Q8N0X2 631 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 TMEM251Q8N6I4 163 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 DMBX1Q8NFW5 382 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF552Q9H707 407 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-204ENST00000501271 MTCH1Q9NZJ7 389 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 RCL1Q9Y2P8 373 aaKnown RBP8.46□□□□□ -1.06
CLIP1-204ENST00000501271 FAM186AA6NE01 2351 aa8.46□□□□□ -1.06
CLIP1-204ENST00000501271 C3orf85A0A1B0GTC6 90 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A10PA6NDY2 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A18PA6NE21 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A16PA6NEW6 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A20PA6NIJ5 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A8PA6NJQ4 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A7PA6NKC0 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A22PA8MWA6 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A12PA8MX19 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A5PA8MXJ8 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A23PA8MXZ1 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF732B4DXR9 585 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 MPPED1O15442 326 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 GPR137BO60478 399 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 SYNGR4O95473 234 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 NAPSAO96009 420 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 SCTP09683 121 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A15PP0C7V4 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A13PP0C7W8 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A14PP0C7W9 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FAM90A24PP0C7X0 464 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 NFYBP25208 207 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 ITGA3P26006 1051 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 HERPUD1Q15011 391 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 CEACAM21Q3KPI0 293 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 DCAF10Q5QP82 559 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 OR4D5Q8NGN0 318 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 LYPD6BQ8NI32 183 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 GPHA2Q96T91 129 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 Q9N2K0 584 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 NDRG3Q9UGV2 375 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 FBXO9Q9UK97 447 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-204ENST00000501271 KNTC1P50748 2209 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 SYNGR1O43759 233 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 COX5BP10606 129 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 P2RY1P47900 373 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 KCNJ3P48549 501 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 NHLH2Q02577 135 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 IL13RA2Q14627 380 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 TSC22D1Q15714 1073 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 SWI5Q1ZZU3 235 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 Q6ZS49 121 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 TBC1D26Q86UD7 250 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 APOBEC3DQ96AK3 386 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-204ENST00000501271 APH1AQ96BI3 265 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 SH3BGRL3Q9H299 93 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 TMED3Q9Y3Q3 217 aa8.45□□□□□ -1.06
CLIP1-204ENST00000501271 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 NKX2-6A6NCS4 301 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 LILRA1O75019 489 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 GLAP06280 429 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 PVALBP20472 110 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-204ENST00000501271 FHITP49789 147 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 RAB1AP62820 205 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 FLI1Q01543 452 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-204ENST00000501271 GPR157Q5UAW9 335 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 ZNF818PQ6ZRF7 136 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 NUFIP2Q7Z417 695 aaKnown RBP8.44□□□□□ -1.06
CLIP1-204ENST00000501271 DPPA2Q7Z7J5 298 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 SAXO1Q8IYX7 474 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 DEFB123Q8N688 67 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 SECTM1Q8WVN6 248 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 POM121L2Q96KW2 1035 aa8.44□□□□□ -1.06
CLIP1-204ENST00000501271 GINS3Q9BRX5 216 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms