RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CT45A7P0DMV0 189 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BOP23527 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 PRTN3P24158 256 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 PYCR1P32322 319 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BBP33778 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 SOX3P41225 446 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 NSG1P42857 185 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BDP58876 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TAS2R31P59538 309 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TAS2R20P59543 309 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BCP62807 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC35A2P78381 396 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ARG2P78540 354 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 MEF2BQ02080 365 aaPredicted RBP2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CFHR1Q03591 330 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 DHRS2Q13268 280 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 RUNX3Q13761 415 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST2H2BEQ16778 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CT45A1Q5HYN5 189 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM255AQ5JRV8 349 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM215Q68D42 235 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF660Q6AZW8 331 aaPredicted RBP2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 OR2T2Q6IF00 324 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF549Q6P9A3 640 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF788Q6ZQV5 615 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 NEGR1Q7Z3B1 354 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 C20orf196Q8IYI0 205 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 PNKDQ8N490 385 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZADH2Q8N4Q0 377 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR3DL3Q8N743 410 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZFP41Q8N8Y5 198 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 OR1S2Q8NGQ3 325 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4F5Q8NH21 305 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4X1Q8NH49 305 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNRF2Q8NHG8 242 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CT45A3Q8NHU0 189 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BHQ93079 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM106AQ96A25 262 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 UPRTQ96BW1 309 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 DIRAS2Q96HU8 199 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TSPAN32Q96QS1 320 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 NKX3-1Q99801 234 aaPredicted RBP2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BNQ99877 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BMQ99879 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 EBPLQ9BY08 206 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 MOB1AQ9H8S9 216 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM206AQ9NX38 181 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 GNG12Q9UBI6 72 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 MUTYHQ9UIF7 546 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TMED7Q9Y3B3 224 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 RAI2Q9Y5P3 530 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ENPP4Q9Y6X5 453 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 V9GYH0 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF638Q14966 1978 aaKnown RBP2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 MROH1Q8NDA8 1641 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 ZFYVE16Q7Z3T8 1539 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TRBV9A0A0B4J1U6 114 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A1W2PPI3 338 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 C3orf70A6NLC5 250 aaPredicted RBP2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 IDSB3KWA1 339 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TNFRSF11BO00300 401 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 PLA2G10O15496 165 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 LYRM1O43325 122 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 AIFM1O95831 613 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 CD160O95971 181 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 APOA2P02652 100 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 CSN2P05814 226 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 H2AFZP0C0S5 128 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC35G6P0C7Q6 338 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 AKAIN1P0CW23 69 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 CXCL2P19875 107 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 PRKACGP22612 351 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 PSMB9P28065 219 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 OR1D4P47884 311 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 OR3A2P47893 321 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 VAMP7P51809 220 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 EMP1P54849 157 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF121P58317 390 aaPredicted RBP2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 PPP1R1AQ13522 171 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 PDGFRLQ15198 375 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF74Q16587 644 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TRMT12Q53H54 448 aaKnown RBP2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 UNQ5815/PRO19632Q6UWF5 114 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 GLIPR1L1Q6UWM5 242 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 MON1BQ7L1V2 547 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 CDC20BQ86Y33 519 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TDHQ8IZJ6 230 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 PLPP5Q8NEB5 264 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 OR11G2Q8NGC1 345 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2T27Q8NH04 317 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 C15orf40Q8WUR7 153 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TSLPQ969D9 159 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 NEIL2Q969S2 332 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM18Q96B42 140 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 SGK494Q96LW2 274 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 NRTNQ99748 197 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 ATG5Q9H1Y0 275 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 HES4Q9HCC6 221 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 RETNQ9HD89 108 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms